Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
MMP2P08253 AC023908.3-201ENST00000564211 3047 ntBASIC15.11■□□□□ 0.01
MMP2P08253 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MMP2P08253 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MMP2P08253 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MMP2P08253 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
MMP2P08253 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MMP2P08253 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MMP2P08253 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MMP2P08253 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MMP2P08253 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MMP2P08253 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
MMP2P08253 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MMP2P08253 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MMP2P08253 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
MMP2P08253 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
MMP2P08253 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
MMP2P08253 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.1■□□□□ 0.01
MMP2P08253 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MMP2P08253 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MMP2P08253 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.1■□□□□ 0.01
MMP2P08253 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MMP2P08253 GCOM2-201ENST00000509133 1104 ntBASIC15.1■□□□□ 0.01
MMP2P08253 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.1■□□□□ 0.01
MMP2P08253 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.1■□□□□ 0.01
MMP2P08253 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
MMP2P08253 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
MMP2P08253 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
MMP2P08253 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MMP2P08253 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MMP2P08253 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MMP2P08253 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
MMP2P08253 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MMP2P08253 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
MMP2P08253 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
MMP2P08253 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MMP2P08253 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.09■□□□□ 0.01
MMP2P08253 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MMP2P08253 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MMP2P08253 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
MMP2P08253 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MMP2P08253 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MMP2P08253 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MMP2P08253 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MMP2P08253 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MMP2P08253 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
MMP2P08253 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
MMP2P08253 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MMP2P08253 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MMP2P08253 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.09■□□□□ 0.01
MMP2P08253 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.09■□□□□ 0.01
MMP2P08253 MIR1909-201ENST00000411312 80 ntBASIC15.09■□□□□ 0.01
MMP2P08253 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.09■□□□□ 0.01
MMP2P08253 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.09■□□□□ 0.01
MMP2P08253 FAM8A4P-201ENST00000435433 1213 ntBASIC15.09■□□□□ 0.01
MMP2P08253 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
MMP2P08253 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MMP2P08253 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MMP2P08253 RAB43P1-201ENST00000561790 589 ntBASIC15.09■□□□□ 0.01
MMP2P08253 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.09■□□□□ 0.01
MMP2P08253 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.09■□□□□ 0.01
MMP2P08253 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.09■□□□□ 0.01
MMP2P08253 OR10B1P-201ENST00000601666 907 ntBASIC15.09■□□□□ 0.01
MMP2P08253 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.09■□□□□ 0.01
MMP2P08253 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
MMP2P08253 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MMP2P08253 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.09■□□□□ 0.01
MMP2P08253 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MMP2P08253 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.09■□□□□ 0.01
MMP2P08253 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.09■□□□□ 0.01
MMP2P08253 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
MMP2P08253 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MMP2P08253 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
MMP2P08253 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.09■□□□□ 0.01
MMP2P08253 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
MMP2P08253 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MMP2P08253 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MMP2P08253 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.09■□□□□ 0.01
MMP2P08253 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.09■□□□□ 0.01
MMP2P08253 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MMP2P08253 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.09■□□□□ 0.01
MMP2P08253 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
MMP2P08253 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0.01
MMP2P08253 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
MMP2P08253 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.08■□□□□ 0.01
MMP2P08253 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.08■□□□□ 0.01
MMP2P08253 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
MMP2P08253 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
MMP2P08253 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
MMP2P08253 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.08■□□□□ 0
MMP2P08253 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
MMP2P08253 AC007191.1-201ENST00000623179 2995 ntBASIC15.08■□□□□ 0
MMP2P08253 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MMP2P08253 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.08■□□□□ 0
MMP2P08253 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MMP2P08253 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
MMP2P08253 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MMP2P08253 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.08■□□□□ 0
MMP2P08253 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MMP2P08253 AC026954.1-201ENST00000429771 1293 ntBASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms