Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.64□□□□□ -0.07
TNFP01375 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.64□□□□□ -0.07
TNFP01375 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.64□□□□□ -0.07
TNFP01375 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.64□□□□□ -0.07
TNFP01375 DUX4L46-201ENST00000566845 751 ntBASIC14.64□□□□□ -0.07
TNFP01375 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.64□□□□□ -0.07
TNFP01375 AC138649.2-201ENST00000615886 705 ntBASIC14.64□□□□□ -0.07
TNFP01375 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFP01375 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFP01375 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TNFP01375 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.64□□□□□ -0.07
TNFP01375 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TNFP01375 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFP01375 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.64□□□□□ -0.07
TNFP01375 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TNFP01375 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
TNFP01375 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.64□□□□□ -0.07
TNFP01375 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TNFP01375 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFP01375 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFP01375 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.64□□□□□ -0.07
TNFP01375 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFP01375 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFP01375 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TNFP01375 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFP01375 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TNFP01375 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFP01375 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.63□□□□□ -0.07
TNFP01375 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TNFP01375 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TNFP01375 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFP01375 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.63□□□□□ -0.07
TNFP01375 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFP01375 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFP01375 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.63□□□□□ -0.07
TNFP01375 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFP01375 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFP01375 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFP01375 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TNFP01375 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TNFP01375 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TNFP01375 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.63□□□□□ -0.07
TNFP01375 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
TNFP01375 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TNFP01375 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.63□□□□□ -0.07
TNFP01375 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TNFP01375 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TNFP01375 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TNFP01375 AC010141.1-201ENST00000411585 623 ntBASIC14.63□□□□□ -0.07
TNFP01375 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.63□□□□□ -0.07
TNFP01375 AC005077.2-201ENST00000449786 690 ntBASIC14.63□□□□□ -0.07
TNFP01375 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TNFP01375 AC106794.1-201ENST00000506935 792 ntBASIC14.63□□□□□ -0.07
TNFP01375 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.63□□□□□ -0.07
TNFP01375 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.63□□□□□ -0.07
TNFP01375 RN7SL163P-201ENST00000583100 276 ntBASIC14.63□□□□□ -0.07
TNFP01375 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.63□□□□□ -0.07
TNFP01375 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
TNFP01375 AL162426.1-201ENST00000624141 743 ntBASIC14.63□□□□□ -0.07
TNFP01375 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC14.63□□□□□ -0.07
TNFP01375 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TNFP01375 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
TNFP01375 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.63□□□□□ -0.07
TNFP01375 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TNFP01375 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFP01375 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TNFP01375 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFP01375 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TNFP01375 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFP01375 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TNFP01375 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFP01375 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TNFP01375 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFP01375 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TNFP01375 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFP01375 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.63□□□□□ -0.07
TNFP01375 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.63□□□□□ -0.07
TNFP01375 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.63□□□□□ -0.07
TNFP01375 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TNFP01375 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFP01375 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.62□□□□□ -0.07
TNFP01375 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFP01375 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFP01375 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFP01375 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFP01375 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TNFP01375 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.62□□□□□ -0.07
TNFP01375 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TNFP01375 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFP01375 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
TNFP01375 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TNFP01375 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TNFP01375 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFP01375 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TNFP01375 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFP01375 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFP01375 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFP01375 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TNFP01375 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFP01375 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms