Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC14.89□□□□□ -0.03
PDGFBP01127 AP005212.2-201ENST00000584979 510 ntBASIC14.89□□□□□ -0.03
PDGFBP01127 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC14.89□□□□□ -0.03
PDGFBP01127 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.89□□□□□ -0.03
PDGFBP01127 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC14.89□□□□□ -0.03
PDGFBP01127 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PDGFBP01127 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDGFBP01127 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDGFBP01127 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.89□□□□□ -0.03
PDGFBP01127 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PDGFBP01127 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PDGFBP01127 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.89□□□□□ -0.03
PDGFBP01127 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDGFBP01127 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.89□□□□□ -0.03
PDGFBP01127 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
PDGFBP01127 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.89□□□□□ -0.03
PDGFBP01127 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
PDGFBP01127 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDGFBP01127 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDGFBP01127 AC013726.1-201ENST00000563747 2285 ntBASIC14.89□□□□□ -0.03
PDGFBP01127 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PDGFBP01127 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PDGFBP01127 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PDGFBP01127 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.88□□□□□ -0.03
PDGFBP01127 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC14.88□□□□□ -0.03
PDGFBP01127 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PDGFBP01127 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PDGFBP01127 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
PDGFBP01127 REXO1L4P-201ENST00000605109 1937 ntBASIC14.88□□□□□ -0.03
PDGFBP01127 TMBIM7P-202ENST00000641474 1516 ntBASIC14.88□□□□□ -0.03
PDGFBP01127 AC099398.1-201ENST00000567919 2776 ntBASIC14.88□□□□□ -0.03
PDGFBP01127 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
PDGFBP01127 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PDGFBP01127 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.88□□□□□ -0.03
PDGFBP01127 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PDGFBP01127 KRT17P5-201ENST00000332088 839 ntBASIC14.88□□□□□ -0.03
PDGFBP01127 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PDGFBP01127 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.88□□□□□ -0.03
PDGFBP01127 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PDGFBP01127 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC14.88□□□□□ -0.03
PDGFBP01127 AL135901.1-201ENST00000451812 333 ntBASIC14.88□□□□□ -0.03
PDGFBP01127 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC14.88□□□□□ -0.03
PDGFBP01127 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
PDGFBP01127 IGHEP1-201ENST00000521393 651 ntBASIC14.88□□□□□ -0.03
PDGFBP01127 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC14.88□□□□□ -0.03
PDGFBP01127 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
PDGFBP01127 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC14.88□□□□□ -0.03
PDGFBP01127 RN7SL357P-201ENST00000581065 298 ntBASIC14.88□□□□□ -0.03
PDGFBP01127 AC010632.2-201ENST00000588369 1224 ntBASIC14.88□□□□□ -0.03
PDGFBP01127 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC14.88□□□□□ -0.03
PDGFBP01127 AC233280.19-201ENST00000633223 136 ntBASIC14.88□□□□□ -0.03
PDGFBP01127 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PDGFBP01127 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PDGFBP01127 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PDGFBP01127 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
PDGFBP01127 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PDGFBP01127 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
PDGFBP01127 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
PDGFBP01127 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
PDGFBP01127 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
PDGFBP01127 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.88□□□□□ -0.03
PDGFBP01127 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PDGFBP01127 ENPP7P8-202ENST00000527856 1345 ntBASIC14.88□□□□□ -0.03
PDGFBP01127 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.88□□□□□ -0.03
PDGFBP01127 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC14.88□□□□□ -0.03
PDGFBP01127 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PDGFBP01127 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.88□□□□□ -0.03
PDGFBP01127 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PDGFBP01127 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.87□□□□□ -0.03
PDGFBP01127 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.87□□□□□ -0.03
PDGFBP01127 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.87□□□□□ -0.03
PDGFBP01127 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDGFBP01127 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.87□□□□□ -0.03
PDGFBP01127 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDGFBP01127 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.87□□□□□ -0.03
PDGFBP01127 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PDGFBP01127 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
PDGFBP01127 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.87□□□□□ -0.03
PDGFBP01127 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
PDGFBP01127 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDGFBP01127 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PDGFBP01127 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PDGFBP01127 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDGFBP01127 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PDGFBP01127 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
PDGFBP01127 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PDGFBP01127 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
PDGFBP01127 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PDGFBP01127 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PDGFBP01127 AC108734.2-201ENST00000420887 1069 ntBASIC14.87□□□□□ -0.03
PDGFBP01127 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC14.87□□□□□ -0.03
PDGFBP01127 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC14.87□□□□□ -0.03
PDGFBP01127 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.87□□□□□ -0.03
PDGFBP01127 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC14.87□□□□□ -0.03
PDGFBP01127 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
PDGFBP01127 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC14.87□□□□□ -0.03
PDGFBP01127 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC14.87□□□□□ -0.03
PDGFBP01127 AC068867.1-201ENST00000559855 150 ntBASIC14.87□□□□□ -0.03
PDGFBP01127 AL022334.2-201ENST00000610000 484 ntBASIC14.87□□□□□ -0.03
PDGFBP01127 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms