Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CSPG5O95196 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CSPG5O95196 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.21■□□□□ 0.18
CSPG5O95196 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG5O95196 AL359258.3-201ENST00000622910 2331 ntBASIC16.2■□□□□ 0.18
CSPG5O95196 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.2■□□□□ 0.18
CSPG5O95196 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC16.2■□□□□ 0.18
CSPG5O95196 AC006480.2-201ENST00000609770 1337 ntBASIC16.2■□□□□ 0.18
CSPG5O95196 AC092978.1-202ENST00000637590 1327 ntBASIC16.2■□□□□ 0.18
CSPG5O95196 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG5O95196 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG5O95196 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG5O95196 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG5O95196 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG5O95196 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG5O95196 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG5O95196 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG5O95196 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.2■□□□□ 0.18
CSPG5O95196 REXO1L5P-201ENST00000622260 2098 ntBASIC16.2■□□□□ 0.18
CSPG5O95196 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG5O95196 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG5O95196 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG5O95196 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG5O95196 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG5O95196 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG5O95196 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CSPG5O95196 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.2■□□□□ 0.18
CSPG5O95196 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CSPG5O95196 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG5O95196 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG5O95196 CICP13-201ENST00000422015 2789 ntBASIC16.2■□□□□ 0.18
CSPG5O95196 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG5O95196 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG5O95196 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG5O95196 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG5O95196 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC16.2■□□□□ 0.18
CSPG5O95196 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.2■□□□□ 0.18
CSPG5O95196 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG5O95196 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CSPG5O95196 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG5O95196 POM121L8P-201ENST00000417732 1281 ntBASIC16.2■□□□□ 0.18
CSPG5O95196 AC007274.2-201ENST00000421675 662 ntBASIC16.2■□□□□ 0.18
CSPG5O95196 AC011742.3-201ENST00000439053 820 ntBASIC16.2■□□□□ 0.18
CSPG5O95196 AC253536.4-201ENST00000440539 267 ntBASIC16.2■□□□□ 0.18
CSPG5O95196 POM121L9P-203ENST00000441984 1285 ntBASIC16.2■□□□□ 0.18
CSPG5O95196 FTLP1-201ENST00000449155 526 ntBASIC16.2■□□□□ 0.18
CSPG5O95196 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.2■□□□□ 0.18
CSPG5O95196 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG5O95196 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CSPG5O95196 MIR4683-201ENST00000579659 81 ntBASIC16.2■□□□□ 0.18
CSPG5O95196 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.2■□□□□ 0.18
CSPG5O95196 AC026740.1-201ENST00000607068 791 ntBASIC16.2■□□□□ 0.18
CSPG5O95196 ZACNP1-201ENST00000612259 710 ntBASIC16.2■□□□□ 0.18
CSPG5O95196 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.2■□□□□ 0.18
CSPG5O95196 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.2■□□□□ 0.18
CSPG5O95196 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.2■□□□□ 0.18
CSPG5O95196 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CSPG5O95196 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG5O95196 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CSPG5O95196 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG5O95196 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG5O95196 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
CSPG5O95196 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.2■□□□□ 0.18
CSPG5O95196 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG5O95196 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CSPG5O95196 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CSPG5O95196 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.2■□□□□ 0.18
CSPG5O95196 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG5O95196 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.2■□□□□ 0.18
CSPG5O95196 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CSPG5O95196 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG5O95196 TUBBP5-203ENST00000508529 1334 ntBASIC16.19■□□□□ 0.18
CSPG5O95196 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSPG5O95196 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSPG5O95196 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSPG5O95196 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSPG5O95196 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSPG5O95196 AL136379.1-201ENST00000623471 2642 ntBASIC16.19■□□□□ 0.18
CSPG5O95196 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CSPG5O95196 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSPG5O95196 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CSPG5O95196 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSPG5O95196 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.19■□□□□ 0.18
CSPG5O95196 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSPG5O95196 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSPG5O95196 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CSPG5O95196 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CSPG5O95196 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CSPG5O95196 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CSPG5O95196 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CSPG5O95196 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CSPG5O95196 IGF1-203ENST00000392904 761 ntTSL 5 BASIC16.19■□□□□ 0.18
CSPG5O95196 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CSPG5O95196 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.19■□□□□ 0.18
CSPG5O95196 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSPG5O95196 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSPG5O95196 AC104073.2-201ENST00000453737 312 ntBASIC16.19■□□□□ 0.18
CSPG5O95196 OARD1-204ENST00000464633 717 ntTSL 2 BASIC16.19■□□□□ 0.18
CSPG5O95196 SUPT4H1P2-201ENST00000501248 353 ntBASIC16.19■□□□□ 0.18
CSPG5O95196 AC106794.1-201ENST00000506935 792 ntBASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms