Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.53□□□□□ -0.24
CDRT1O95170 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CDRT1O95170 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDRT1O95170 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.53□□□□□ -0.24
CDRT1O95170 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.53□□□□□ -0.24
CDRT1O95170 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDRT1O95170 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.53□□□□□ -0.24
CDRT1O95170 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.53□□□□□ -0.24
CDRT1O95170 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.53□□□□□ -0.24
CDRT1O95170 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CDRT1O95170 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CDRT1O95170 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.53□□□□□ -0.24
CDRT1O95170 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.53□□□□□ -0.24
CDRT1O95170 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CDRT1O95170 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.52□□□□□ -0.24
CDRT1O95170 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.24
CDRT1O95170 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
CDRT1O95170 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
CDRT1O95170 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.52□□□□□ -0.24
CDRT1O95170 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.52□□□□□ -0.24
CDRT1O95170 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CDRT1O95170 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.52□□□□□ -0.25
CDRT1O95170 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
CDRT1O95170 AZGP1P1-201ENST00000411909 902 ntBASIC13.52□□□□□ -0.25
CDRT1O95170 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.52□□□□□ -0.25
CDRT1O95170 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CDRT1O95170 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.52□□□□□ -0.25
CDRT1O95170 SPCS2P4-201ENST00000436160 681 ntBASIC13.52□□□□□ -0.25
CDRT1O95170 KRT8P48-201ENST00000515599 1220 ntBASIC13.52□□□□□ -0.25
CDRT1O95170 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.52□□□□□ -0.25
CDRT1O95170 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.52□□□□□ -0.25
CDRT1O95170 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
CDRT1O95170 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.52□□□□□ -0.25
CDRT1O95170 AC106730.1-201ENST00000566722 1090 ntBASIC13.52□□□□□ -0.25
CDRT1O95170 FAM197Y3-203ENST00000618346 717 ntBASIC13.52□□□□□ -0.25
CDRT1O95170 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CDRT1O95170 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
CDRT1O95170 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
CDRT1O95170 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CDRT1O95170 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.52□□□□□ -0.25
CDRT1O95170 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.52□□□□□ -0.25
CDRT1O95170 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.52□□□□□ -0.25
CDRT1O95170 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CDRT1O95170 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CDRT1O95170 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CDRT1O95170 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CDRT1O95170 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CDRT1O95170 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDRT1O95170 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDRT1O95170 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDRT1O95170 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDRT1O95170 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CDRT1O95170 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CDRT1O95170 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDRT1O95170 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDRT1O95170 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CDRT1O95170 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.51□□□□□ -0.25
CDRT1O95170 AC016397.2-201ENST00000624848 1985 ntBASIC13.51□□□□□ -0.25
CDRT1O95170 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDRT1O95170 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDRT1O95170 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CDRT1O95170 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CDRT1O95170 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CDRT1O95170 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.51□□□□□ -0.25
CDRT1O95170 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.51□□□□□ -0.25
CDRT1O95170 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDRT1O95170 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CDRT1O95170 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.51□□□□□ -0.25
CDRT1O95170 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDRT1O95170 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.51□□□□□ -0.25
CDRT1O95170 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.51□□□□□ -0.25
CDRT1O95170 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CDRT1O95170 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDRT1O95170 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDRT1O95170 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.51□□□□□ -0.25
CDRT1O95170 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDRT1O95170 MIR346-201ENST00000362234 95 ntBASIC13.51□□□□□ -0.25
CDRT1O95170 ADH5P3-201ENST00000433842 1137 ntBASIC13.51□□□□□ -0.25
CDRT1O95170 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.51□□□□□ -0.25
CDRT1O95170 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CDRT1O95170 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CDRT1O95170 AC079140.1-201ENST00000508039 487 ntBASIC13.51□□□□□ -0.25
CDRT1O95170 IGHV3-62-201ENST00000520057 340 ntBASIC13.51□□□□□ -0.25
CDRT1O95170 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.51□□□□□ -0.25
CDRT1O95170 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC13.51□□□□□ -0.25
CDRT1O95170 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.51□□□□□ -0.25
CDRT1O95170 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.51□□□□□ -0.25
CDRT1O95170 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CDRT1O95170 AC026120.1-201ENST00000611536 926 ntBASIC13.51□□□□□ -0.25
CDRT1O95170 BX640515.1-201ENST00000617215 977 ntBASIC13.51□□□□□ -0.25
CDRT1O95170 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDRT1O95170 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDRT1O95170 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
CDRT1O95170 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDRT1O95170 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.51□□□□□ -0.25
CDRT1O95170 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.51□□□□□ -0.25
CDRT1O95170 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDRT1O95170 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CDRT1O95170 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CDRT1O95170 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms