Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCNKO75909 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCNKO75909 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCNKO75909 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCNKO75909 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCNKO75909 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCNKO75909 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCNKO75909 TCAM1P-207ENST00000485295 1537 ntBASIC13.1□□□□□ -0.31
CCNKO75909 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCNKO75909 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCNKO75909 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCNKO75909 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCNKO75909 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCNKO75909 AP000437.1-201ENST00000624057 2085 ntBASIC13.1□□□□□ -0.31
CCNKO75909 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCNKO75909 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.1□□□□□ -0.31
CCNKO75909 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCNKO75909 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC13.1□□□□□ -0.31
CCNKO75909 NUS1P2-201ENST00000417358 873 ntBASIC13.1□□□□□ -0.31
CCNKO75909 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
CCNKO75909 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCNKO75909 AC022447.6-201ENST00000515522 438 ntBASIC13.1□□□□□ -0.31
CCNKO75909 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCNKO75909 PPOX-219ENST00000544598 813 ntTSL 2 BASIC13.1□□□□□ -0.31
CCNKO75909 MPI-205ENST00000562606 1052 ntTSL 3 BASIC13.1□□□□□ -0.31
CCNKO75909 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC13.1□□□□□ -0.31
CCNKO75909 AP001269.4-201ENST00000609611 512 ntBASIC13.1□□□□□ -0.31
CCNKO75909 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCNKO75909 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
CCNKO75909 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCNKO75909 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC13.1□□□□□ -0.31
CCNKO75909 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.1□□□□□ -0.31
CCNKO75909 USP47-202ENST00000339865 7775 ntTSL 2 BASIC13.1□□□□□ -0.31
CCNKO75909 REXO1L1P-201ENST00000379010 6598 ntBASIC13.1□□□□□ -0.31
CCNKO75909 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCNKO75909 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CCNKO75909 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCNKO75909 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC13.1□□□□□ -0.31
CCNKO75909 AC134407.3-201ENST00000624035 2139 ntBASIC13.1□□□□□ -0.31
CCNKO75909 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
CCNKO75909 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC13.1□□□□□ -0.31
CCNKO75909 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CCNKO75909 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CCNKO75909 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC13.1□□□□□ -0.31
CCNKO75909 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCNKO75909 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCNKO75909 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCNKO75909 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
CCNKO75909 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCNKO75909 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCNKO75909 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC13.1□□□□□ -0.31
CCNKO75909 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCNKO75909 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCNKO75909 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CCNKO75909 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CCNKO75909 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCNKO75909 MED25-212ENST00000618715 1467 ntTSL 5 BASIC13.1□□□□□ -0.31
CCNKO75909 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCNKO75909 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CCNKO75909 AC011700.1-201ENST00000610409 2627 ntBASIC13.09□□□□□ -0.31
CCNKO75909 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCNKO75909 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCNKO75909 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCNKO75909 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCNKO75909 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCNKO75909 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCNKO75909 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCNKO75909 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCNKO75909 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CCNKO75909 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCNKO75909 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CCNKO75909 AC022400.8-201ENST00000623453 3599 ntBASIC13.09□□□□□ -0.31
CCNKO75909 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.09□□□□□ -0.31
CCNKO75909 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCNKO75909 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CCNKO75909 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
CCNKO75909 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCNKO75909 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC13.09□□□□□ -0.31
CCNKO75909 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
CCNKO75909 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCNKO75909 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCNKO75909 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCNKO75909 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.09□□□□□ -0.31
CCNKO75909 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCNKO75909 POM121L3P-201ENST00000419331 1163 ntBASIC13.09□□□□□ -0.31
CCNKO75909 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CCNKO75909 PRYP5-201ENST00000451909 266 ntBASIC13.09□□□□□ -0.31
CCNKO75909 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.09□□□□□ -0.31
CCNKO75909 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CCNKO75909 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CCNKO75909 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC13.09□□□□□ -0.31
CCNKO75909 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCNKO75909 MIR5100-201ENST00000579544 119 ntBASIC13.09□□□□□ -0.31
CCNKO75909 AP005117.1-201ENST00000584346 1413 ntBASIC13.09□□□□□ -0.31
CCNKO75909 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC13.09□□□□□ -0.31
CCNKO75909 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCNKO75909 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CCNKO75909 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCNKO75909 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CCNKO75909 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms