Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC6.51□□□□□ -1.37
USH2AO75445 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC6.51□□□□□ -1.37
USH2AO75445 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC6.51□□□□□ -1.37
USH2AO75445 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC6.51□□□□□ -1.37
USH2AO75445 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC6.51□□□□□ -1.37
USH2AO75445 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
USH2AO75445 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
USH2AO75445 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
USH2AO75445 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC6.51□□□□□ -1.37
USH2AO75445 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
USH2AO75445 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
USH2AO75445 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
USH2AO75445 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
USH2AO75445 LINC00528-201ENST00000600723 2160 ntBASIC6.51□□□□□ -1.37
USH2AO75445 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC6.51□□□□□ -1.37
USH2AO75445 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
USH2AO75445 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
USH2AO75445 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC6.51□□□□□ -1.37
USH2AO75445 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC6.51□□□□□ -1.37
USH2AO75445 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
USH2AO75445 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
USH2AO75445 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
USH2AO75445 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC6.51□□□□□ -1.37
USH2AO75445 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
USH2AO75445 GUSBP10-201ENST00000417412 665 ntBASIC6.51□□□□□ -1.37
USH2AO75445 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC6.51□□□□□ -1.37
USH2AO75445 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC6.51□□□□□ -1.37
USH2AO75445 AC098934.1-203ENST00000442868 1262 ntBASIC6.51□□□□□ -1.37
USH2AO75445 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
USH2AO75445 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC6.51□□□□□ -1.37
USH2AO75445 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC6.51□□□□□ -1.37
USH2AO75445 CHD2-218ENST00000629346 1249 ntTSL 5 BASIC6.51□□□□□ -1.37
USH2AO75445 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
USH2AO75445 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC6.51□□□□□ -1.37
USH2AO75445 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
USH2AO75445 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
USH2AO75445 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC6.51□□□□□ -1.37
USH2AO75445 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
USH2AO75445 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC6.51□□□□□ -1.37
USH2AO75445 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
USH2AO75445 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
USH2AO75445 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
USH2AO75445 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
USH2AO75445 AC006449.6-201ENST00000612330 2296 ntBASIC6.51□□□□□ -1.37
USH2AO75445 VKORC1-203ENST00000354895 901 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
USH2AO75445 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC6.51□□□□□ -1.37
USH2AO75445 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC6.51□□□□□ -1.37
USH2AO75445 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
USH2AO75445 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC6.51□□□□□ -1.37
USH2AO75445 IGHEP2-201ENST00000519308 1256 ntBASIC6.51□□□□□ -1.37
USH2AO75445 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
USH2AO75445 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
USH2AO75445 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
USH2AO75445 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
USH2AO75445 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
USH2AO75445 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
USH2AO75445 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
USH2AO75445 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
USH2AO75445 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC6.5□□□□□ -1.37
USH2AO75445 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
USH2AO75445 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
USH2AO75445 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC6.5□□□□□ -1.37
USH2AO75445 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
USH2AO75445 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
USH2AO75445 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
USH2AO75445 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
USH2AO75445 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC6.5□□□□□ -1.37
USH2AO75445 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
USH2AO75445 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
USH2AO75445 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
USH2AO75445 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC6.5□□□□□ -1.37
USH2AO75445 WT1-209ENST00000530998 2421 ntTSL 2 BASIC6.5□□□□□ -1.37
USH2AO75445 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC6.5□□□□□ -1.37
USH2AO75445 AL512599.1-201ENST00000430724 685 ntBASIC6.5□□□□□ -1.37
USH2AO75445 AC078882.1-201ENST00000436132 416 ntTSL 2 BASIC6.5□□□□□ -1.37
USH2AO75445 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
USH2AO75445 AC011431.1-201ENST00000512971 230 ntBASIC6.5□□□□□ -1.37
USH2AO75445 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC6.5□□□□□ -1.37
USH2AO75445 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC6.5□□□□□ -1.37
USH2AO75445 AP002353.1-201ENST00000528257 1599 ntBASIC6.5□□□□□ -1.37
USH2AO75445 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
USH2AO75445 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
USH2AO75445 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
USH2AO75445 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
USH2AO75445 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC6.5□□□□□ -1.37
USH2AO75445 TNRC18P3-201ENST00000441896 2691 ntBASIC6.5□□□□□ -1.37
USH2AO75445 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
USH2AO75445 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC6.5□□□□□ -1.37
USH2AO75445 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
USH2AO75445 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC6.5□□□□□ -1.37
USH2AO75445 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC6.5□□□□□ -1.37
USH2AO75445 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
USH2AO75445 WASH3P-207ENST00000560956 1394 ntBASIC6.5□□□□□ -1.37
USH2AO75445 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
USH2AO75445 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
USH2AO75445 OR7E115P-201ENST00000382617 1024 ntBASIC6.5□□□□□ -1.37
USH2AO75445 AC000078.1-201ENST00000420617 682 ntBASIC6.5□□□□□ -1.37
USH2AO75445 IFNWP2-201ENST00000431203 580 ntBASIC6.5□□□□□ -1.37
USH2AO75445 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
USH2AO75445 LINC01833-204ENST00000444871 581 ntTSL 3 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms