Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.32□□□□□ -0.12
SCN2BO60939 AC023310.3-201ENST00000557027 670 ntBASIC14.32□□□□□ -0.12
SCN2BO60939 AC100756.1-201ENST00000562736 682 ntBASIC14.32□□□□□ -0.12
SCN2BO60939 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.32□□□□□ -0.12
SCN2BO60939 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.32□□□□□ -0.12
SCN2BO60939 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.32□□□□□ -0.12
SCN2BO60939 AC138749.3-201ENST00000567691 622 ntBASIC14.32□□□□□ -0.12
SCN2BO60939 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.32□□□□□ -0.12
SCN2BO60939 GPALPP1-207ENST00000611650 899 ntBASIC14.32□□□□□ -0.12
SCN2BO60939 AC116165.1-201ENST00000611806 668 ntBASIC14.32□□□□□ -0.12
SCN2BO60939 AL390754.1-201ENST00000619088 582 ntBASIC14.32□□□□□ -0.12
SCN2BO60939 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
SCN2BO60939 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
SCN2BO60939 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.32□□□□□ -0.12
SCN2BO60939 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SCN2BO60939 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.32□□□□□ -0.12
SCN2BO60939 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SCN2BO60939 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.32□□□□□ -0.12
SCN2BO60939 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SCN2BO60939 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SCN2BO60939 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SCN2BO60939 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SCN2BO60939 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.32□□□□□ -0.12
SCN2BO60939 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.32□□□□□ -0.12
SCN2BO60939 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.32□□□□□ -0.12
SCN2BO60939 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SCN2BO60939 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SCN2BO60939 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SCN2BO60939 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.31□□□□□ -0.12
SCN2BO60939 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SCN2BO60939 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SCN2BO60939 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SCN2BO60939 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SCN2BO60939 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SCN2BO60939 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SCN2BO60939 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SCN2BO60939 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.31□□□□□ -0.12
SCN2BO60939 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.31□□□□□ -0.12
SCN2BO60939 VDAC1P7-201ENST00000462417 847 ntBASIC14.31□□□□□ -0.12
SCN2BO60939 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.31□□□□□ -0.12
SCN2BO60939 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.31□□□□□ -0.12
SCN2BO60939 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.31□□□□□ -0.12
SCN2BO60939 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.31□□□□□ -0.12
SCN2BO60939 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.31□□□□□ -0.12
SCN2BO60939 DUX4L47-201ENST00000566374 394 ntBASIC14.31□□□□□ -0.12
SCN2BO60939 AC036164.1-201ENST00000570544 333 ntBASIC14.31□□□□□ -0.12
SCN2BO60939 BRI3BPP1-201ENST00000594224 787 ntBASIC14.31□□□□□ -0.12
SCN2BO60939 AL049840.4-201ENST00000602422 811 ntBASIC14.31□□□□□ -0.12
SCN2BO60939 AC006538.3-201ENST00000612495 578 ntBASIC14.31□□□□□ -0.12
SCN2BO60939 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.31□□□□□ -0.12
SCN2BO60939 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.31□□□□□ -0.12
SCN2BO60939 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SCN2BO60939 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SCN2BO60939 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SCN2BO60939 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SCN2BO60939 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
SCN2BO60939 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
SCN2BO60939 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SCN2BO60939 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SCN2BO60939 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SCN2BO60939 KRT8P14-201ENST00000414254 1442 ntBASIC14.31□□□□□ -0.12
SCN2BO60939 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.31□□□□□ -0.12
SCN2BO60939 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.31□□□□□ -0.12
SCN2BO60939 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SCN2BO60939 LINC01230-201ENST00000625222 3017 ntBASIC14.31□□□□□ -0.12
SCN2BO60939 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SCN2BO60939 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SCN2BO60939 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SCN2BO60939 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.3□□□□□ -0.12
SCN2BO60939 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SCN2BO60939 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SCN2BO60939 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SCN2BO60939 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SCN2BO60939 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SCN2BO60939 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SCN2BO60939 AC055811.4-201ENST00000624039 1754 ntBASIC14.3□□□□□ -0.12
SCN2BO60939 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SCN2BO60939 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SCN2BO60939 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SCN2BO60939 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SCN2BO60939 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SCN2BO60939 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
SCN2BO60939 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.3□□□□□ -0.12
SCN2BO60939 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.3□□□□□ -0.12
SCN2BO60939 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.3□□□□□ -0.12
SCN2BO60939 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.3□□□□□ -0.12
SCN2BO60939 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SCN2BO60939 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.3□□□□□ -0.12
SCN2BO60939 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.3□□□□□ -0.12
SCN2BO60939 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SCN2BO60939 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.3□□□□□ -0.12
SCN2BO60939 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.3□□□□□ -0.12
SCN2BO60939 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.3□□□□□ -0.12
SCN2BO60939 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.3□□□□□ -0.12
SCN2BO60939 AC104794.3-201ENST00000566840 1248 ntBASIC14.3□□□□□ -0.12
SCN2BO60939 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
SCN2BO60939 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.3□□□□□ -0.12
SCN2BO60939 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
SCN2BO60939 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.3□□□□□ -0.12
SCN2BO60939 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms