Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC12.12□□□□□ -0.47
UPK2O00526 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
UPK2O00526 AC027601.5-201ENST00000624065 2482 ntBASIC12.12□□□□□ -0.47
UPK2O00526 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UPK2O00526 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
UPK2O00526 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
UPK2O00526 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
UPK2O00526 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UPK2O00526 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
UPK2O00526 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
UPK2O00526 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UPK2O00526 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UPK2O00526 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
UPK2O00526 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UPK2O00526 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC12.12□□□□□ -0.47
UPK2O00526 DOC2GP-202ENST00000514950 1163 ntBASIC12.12□□□□□ -0.47
UPK2O00526 AC022447.6-201ENST00000515522 438 ntBASIC12.12□□□□□ -0.47
UPK2O00526 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.12□□□□□ -0.47
UPK2O00526 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.12□□□□□ -0.47
UPK2O00526 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.12□□□□□ -0.47
UPK2O00526 AC023310.3-201ENST00000557027 670 ntBASIC12.12□□□□□ -0.47
UPK2O00526 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.12□□□□□ -0.47
UPK2O00526 AC100756.1-201ENST00000562736 682 ntBASIC12.12□□□□□ -0.47
UPK2O00526 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
UPK2O00526 AC138749.3-201ENST00000567691 622 ntBASIC12.12□□□□□ -0.47
UPK2O00526 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
UPK2O00526 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC12.12□□□□□ -0.47
UPK2O00526 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.12□□□□□ -0.47
UPK2O00526 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC12.12□□□□□ -0.47
UPK2O00526 AC116165.1-201ENST00000611806 668 ntBASIC12.12□□□□□ -0.47
UPK2O00526 AC023511.2-201ENST00000618803 211 ntBASIC12.12□□□□□ -0.47
UPK2O00526 BX539320.1-201ENST00000623759 877 ntBASIC12.12□□□□□ -0.47
UPK2O00526 PRSS30P-206ENST00000641773 873 ntBASIC12.12□□□□□ -0.47
UPK2O00526 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UPK2O00526 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UPK2O00526 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
UPK2O00526 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.12□□□□□ -0.47
UPK2O00526 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
UPK2O00526 ST20-AS1-201ENST00000560255 4223 ntBASIC12.12□□□□□ -0.47
UPK2O00526 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
UPK2O00526 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
UPK2O00526 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
UPK2O00526 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UPK2O00526 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
UPK2O00526 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UPK2O00526 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UPK2O00526 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
UPK2O00526 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.12□□□□□ -0.47
UPK2O00526 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
UPK2O00526 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.12□□□□□ -0.47
UPK2O00526 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.12□□□□□ -0.47
UPK2O00526 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
UPK2O00526 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UPK2O00526 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UPK2O00526 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
UPK2O00526 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.11□□□□□ -0.47
UPK2O00526 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.11□□□□□ -0.47
UPK2O00526 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UPK2O00526 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.11□□□□□ -0.47
UPK2O00526 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UPK2O00526 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UPK2O00526 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.11□□□□□ -0.47
UPK2O00526 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.11□□□□□ -0.47
UPK2O00526 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.11□□□□□ -0.47
UPK2O00526 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UPK2O00526 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.11□□□□□ -0.47
UPK2O00526 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UPK2O00526 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC12.11□□□□□ -0.47
UPK2O00526 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UPK2O00526 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.11□□□□□ -0.47
UPK2O00526 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.11□□□□□ -0.47
UPK2O00526 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UPK2O00526 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.11□□□□□ -0.47
UPK2O00526 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UPK2O00526 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.11□□□□□ -0.47
UPK2O00526 MEP1AP4-201ENST00000423244 1087 ntBASIC12.11□□□□□ -0.47
UPK2O00526 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UPK2O00526 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC12.11□□□□□ -0.47
UPK2O00526 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC12.11□□□□□ -0.47
UPK2O00526 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UPK2O00526 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.11□□□□□ -0.47
UPK2O00526 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UPK2O00526 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC12.11□□□□□ -0.47
UPK2O00526 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UPK2O00526 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
UPK2O00526 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
UPK2O00526 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.11□□□□□ -0.47
UPK2O00526 RNA5-8SN1-201ENST00000610460 153 ntBASIC12.11□□□□□ -0.47
UPK2O00526 RNA5-8SN5-202ENST00000612463 153 ntBASIC12.11□□□□□ -0.47
UPK2O00526 RNA5-8SN4-201ENST00000613359 153 ntBASIC12.11□□□□□ -0.47
UPK2O00526 RNA5-8SN5-201ENST00000619471 153 ntBASIC12.11□□□□□ -0.47
UPK2O00526 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UPK2O00526 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
UPK2O00526 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UPK2O00526 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.11□□□□□ -0.47
UPK2O00526 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UPK2O00526 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UPK2O00526 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UPK2O00526 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.11□□□□□ -0.47
UPK2O00526 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms