Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
NPIPA3F8WFD2 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
NPIPA3F8WFD2 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
NPIPA3F8WFD2 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA3F8WFD2 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA3F8WFD2 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC13.76□□□□□ -0.21
NPIPA3F8WFD2 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.76□□□□□ -0.21
NPIPA3F8WFD2 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA3F8WFD2 MIR326-201ENST00000362220 95 ntBASIC13.76□□□□□ -0.21
NPIPA3F8WFD2 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
NPIPA3F8WFD2 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.76□□□□□ -0.21
NPIPA3F8WFD2 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
NPIPA3F8WFD2 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA3F8WFD2 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.76□□□□□ -0.21
NPIPA3F8WFD2 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.76□□□□□ -0.21
NPIPA3F8WFD2 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
NPIPA3F8WFD2 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA3F8WFD2 MIR4741-201ENST00000579822 90 ntBASIC13.76□□□□□ -0.21
NPIPA3F8WFD2 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.76□□□□□ -0.21
NPIPA3F8WFD2 AC243960.2-201ENST00000600996 747 ntBASIC13.76□□□□□ -0.21
NPIPA3F8WFD2 MIR6787-201ENST00000616675 61 ntBASIC13.76□□□□□ -0.21
NPIPA3F8WFD2 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.76□□□□□ -0.21
NPIPA3F8WFD2 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.76□□□□□ -0.21
NPIPA3F8WFD2 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA3F8WFD2 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA3F8WFD2 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA3F8WFD2 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.76□□□□□ -0.21
NPIPA3F8WFD2 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA3F8WFD2 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA3F8WFD2 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA3F8WFD2 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.76□□□□□ -0.21
NPIPA3F8WFD2 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA3F8WFD2 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA3F8WFD2 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.76□□□□□ -0.21
NPIPA3F8WFD2 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.76□□□□□ -0.21
NPIPA3F8WFD2 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA3F8WFD2 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 AL139094.1-201ENST00000405549 1188 ntBASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 GHSR-202ENST00000427970 912 ntBASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 AC006453.4-201ENST00000636949 1252 ntBASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 AC144831.1-201ENST00000573312 2656 ntBASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA3F8WFD2 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 DBET-201ENST00000630918 3363 ntBASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 WASH3P-207ENST00000560956 1394 ntBASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 AC020907.1-201ENST00000616460 1350 ntBASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 AC138969.2-201ENST00000532739 9932 ntBASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA3F8WFD2 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms