Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPA2E9PIF3 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPA2E9PIF3 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPA2E9PIF3 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
NPIPA2E9PIF3 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
NPIPA2E9PIF3 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
NPIPA2E9PIF3 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPA2E9PIF3 AL354989.2-201ENST00000435838 1540 ntBASIC13.77□□□□□ -0.21
NPIPA2E9PIF3 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPA2E9PIF3 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.77□□□□□ -0.21
NPIPA2E9PIF3 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
NPIPA2E9PIF3 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.77□□□□□ -0.21
NPIPA2E9PIF3 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.77□□□□□ -0.21
NPIPA2E9PIF3 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.77□□□□□ -0.21
NPIPA2E9PIF3 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
NPIPA2E9PIF3 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.77□□□□□ -0.21
NPIPA2E9PIF3 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
NPIPA2E9PIF3 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.77□□□□□ -0.21
NPIPA2E9PIF3 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.77□□□□□ -0.21
NPIPA2E9PIF3 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.77□□□□□ -0.21
NPIPA2E9PIF3 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.77□□□□□ -0.21
NPIPA2E9PIF3 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPA2E9PIF3 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.77□□□□□ -0.21
NPIPA2E9PIF3 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.77□□□□□ -0.21
NPIPA2E9PIF3 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.77□□□□□ -0.21
NPIPA2E9PIF3 ECM1P1-201ENST00000604092 1279 ntBASIC13.77□□□□□ -0.21
NPIPA2E9PIF3 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPA2E9PIF3 AL158070.2-201ENST00000623713 1621 ntBASIC13.77□□□□□ -0.21
NPIPA2E9PIF3 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
NPIPA2E9PIF3 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPA2E9PIF3 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NPIPA2E9PIF3 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
NPIPA2E9PIF3 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
NPIPA2E9PIF3 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 AC006486.2-201ENST00000624246 2199 ntBASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 MIR326-201ENST00000362220 95 ntBASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 MIR4741-201ENST00000579822 90 ntBASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 AC243960.2-201ENST00000600996 747 ntBASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 MIR6787-201ENST00000616675 61 ntBASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.76□□□□□ -0.21
NPIPA2E9PIF3 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
NPIPA2E9PIF3 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms