Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LRIT2A6NDA9 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
LRIT2A6NDA9 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 PCDHA3-202ENST00000532566 4594 ntBASIC14.32□□□□□ -0.12
LRIT2A6NDA9 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 TLE1P1-201ENST00000422965 589 ntBASIC14.32□□□□□ -0.12
LRIT2A6NDA9 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 C2orf27AP3-201ENST00000434123 579 ntBASIC14.32□□□□□ -0.12
LRIT2A6NDA9 AC016694.1-201ENST00000434179 700 ntBASIC14.32□□□□□ -0.12
LRIT2A6NDA9 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 AL354718.3-201ENST00000616414 581 ntBASIC14.32□□□□□ -0.12
LRIT2A6NDA9 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 CR382287.1-201ENST00000623954 586 ntBASIC14.32□□□□□ -0.12
LRIT2A6NDA9 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 CLUHP2-201ENST00000426660 1303 ntBASIC14.32□□□□□ -0.12
LRIT2A6NDA9 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRIT2A6NDA9 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRIT2A6NDA9 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
LRIT2A6NDA9 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRIT2A6NDA9 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRIT2A6NDA9 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.31□□□□□ -0.12
LRIT2A6NDA9 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.31□□□□□ -0.12
LRIT2A6NDA9 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.31□□□□□ -0.12
LRIT2A6NDA9 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRIT2A6NDA9 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRIT2A6NDA9 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.31□□□□□ -0.12
LRIT2A6NDA9 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRIT2A6NDA9 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRIT2A6NDA9 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.31□□□□□ -0.12
LRIT2A6NDA9 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.31□□□□□ -0.12
LRIT2A6NDA9 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRIT2A6NDA9 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRIT2A6NDA9 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LRIT2A6NDA9 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
LRIT2A6NDA9 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRIT2A6NDA9 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.31□□□□□ -0.12
LRIT2A6NDA9 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.31□□□□□ -0.12
LRIT2A6NDA9 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRIT2A6NDA9 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.31□□□□□ -0.12
LRIT2A6NDA9 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.31□□□□□ -0.12
LRIT2A6NDA9 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.31□□□□□ -0.12
LRIT2A6NDA9 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
LRIT2A6NDA9 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.31□□□□□ -0.12
LRIT2A6NDA9 AC007969.1-201ENST00000433675 447 ntBASIC14.31□□□□□ -0.12
LRIT2A6NDA9 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRIT2A6NDA9 FTH1P14-201ENST00000482930 551 ntBASIC14.31□□□□□ -0.12
LRIT2A6NDA9 MESTP3-201ENST00000503460 968 ntBASIC14.31□□□□□ -0.12
LRIT2A6NDA9 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRIT2A6NDA9 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.31□□□□□ -0.12
LRIT2A6NDA9 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.31□□□□□ -0.12
LRIT2A6NDA9 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.31□□□□□ -0.12
LRIT2A6NDA9 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.31□□□□□ -0.12
LRIT2A6NDA9 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.31□□□□□ -0.12
LRIT2A6NDA9 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRIT2A6NDA9 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRIT2A6NDA9 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.31□□□□□ -0.12
LRIT2A6NDA9 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRIT2A6NDA9 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
LRIT2A6NDA9 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRIT2A6NDA9 AC003102.2-201ENST00000589195 1469 ntBASIC14.31□□□□□ -0.12
LRIT2A6NDA9 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms