Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 AC023908.3-201ENST00000564211 3047 ntBASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC162PA2VCL2 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 ACKR1-201ENST00000368121 1240 ntBASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 EIF3FP3-201ENST00000434851 1086 ntBASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 AC026434.2-201ENST00000506094 1078 ntBASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 AC055811.4-201ENST00000624039 1754 ntBASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC162PA2VCL2 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC162PA2VCL2 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CCDC162PA2VCL2 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC162PA2VCL2 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC162PA2VCL2 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.1■□□□□ 0.01
CCDC162PA2VCL2 MYO15B-237ENST00000642007 4893 ntBASIC15.1■□□□□ 0.01
CCDC162PA2VCL2 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC162PA2VCL2 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC162PA2VCL2 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC162PA2VCL2 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC162PA2VCL2 AC140479.7-201ENST00000636301 2332 ntBASIC15.1■□□□□ 0.01
CCDC162PA2VCL2 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC162PA2VCL2 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC162PA2VCL2 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CCDC162PA2VCL2 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC162PA2VCL2 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC162PA2VCL2 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.1■□□□□ 0.01
CCDC162PA2VCL2 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
CCDC162PA2VCL2 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC162PA2VCL2 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC162PA2VCL2 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CCDC162PA2VCL2 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
CCDC162PA2VCL2 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.1■□□□□ 0.01
CCDC162PA2VCL2 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.1■□□□□ 0.01
CCDC162PA2VCL2 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC162PA2VCL2 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.1■□□□□ 0.01
CCDC162PA2VCL2 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC162PA2VCL2 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.1■□□□□ 0.01
CCDC162PA2VCL2 RPSAP52-203ENST00000622976 1023 ntBASIC15.1■□□□□ 0.01
CCDC162PA2VCL2 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.1■□□□□ 0.01
CCDC162PA2VCL2 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
CCDC162PA2VCL2 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC162PA2VCL2 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC162PA2VCL2 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC162PA2VCL2 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CCDC162PA2VCL2 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
CCDC162PA2VCL2 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC162PA2VCL2 CR383656.2-201ENST00000548656 2254 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms