Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 AL121723.1-201ENST00000445194 1519 ntBASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 UXT-AS1-201ENST00000590504 1525 ntBASIC13.29□□□□□ -0.28
TRDV1A0A1B0GX56 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 CICP16-201ENST00000502609 2813 ntBASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 AC007967.2-201ENST00000432613 625 ntBASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 KRT8P48-201ENST00000515599 1220 ntBASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 AP001005.1-201ENST00000571755 1248 ntBASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 AC092902.6-201ENST00000641783 218 ntBASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 AC020658.7-201ENST00000624274 2442 ntBASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRDV1A0A1B0GX56 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TRDV1A0A1B0GX56 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.27□□□□□ -0.28
TRDV1A0A1B0GX56 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRDV1A0A1B0GX56 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRDV1A0A1B0GX56 RN7SL832P-201ENST00000607781 1756 ntBASIC13.27□□□□□ -0.28
TRDV1A0A1B0GX56 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRDV1A0A1B0GX56 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRDV1A0A1B0GX56 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.27□□□□□ -0.28
TRDV1A0A1B0GX56 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.27□□□□□ -0.28
TRDV1A0A1B0GX56 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.27□□□□□ -0.28
TRDV1A0A1B0GX56 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.27□□□□□ -0.28
TRDV1A0A1B0GX56 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRDV1A0A1B0GX56 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
TRDV1A0A1B0GX56 AL157414.3-201ENST00000624276 1954 ntBASIC13.27□□□□□ -0.28
TRDV1A0A1B0GX56 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.27□□□□□ -0.28
TRDV1A0A1B0GX56 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TRDV1A0A1B0GX56 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TRDV1A0A1B0GX56 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRDV1A0A1B0GX56 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRDV1A0A1B0GX56 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRDV1A0A1B0GX56 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.27□□□□□ -0.29
TRDV1A0A1B0GX56 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.27□□□□□ -0.29
TRDV1A0A1B0GX56 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRDV1A0A1B0GX56 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.27□□□□□ -0.29
TRDV1A0A1B0GX56 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.27□□□□□ -0.29
TRDV1A0A1B0GX56 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC13.27□□□□□ -0.29
TRDV1A0A1B0GX56 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.27□□□□□ -0.29
TRDV1A0A1B0GX56 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRDV1A0A1B0GX56 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.27□□□□□ -0.29
TRDV1A0A1B0GX56 ARL16-209ENST00000573715 763 ntTSL 3 BASIC13.27□□□□□ -0.29
TRDV1A0A1B0GX56 ARL16-211ENST00000576135 694 ntTSL 3 BASIC13.27□□□□□ -0.29
TRDV1A0A1B0GX56 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.27□□□□□ -0.29
TRDV1A0A1B0GX56 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRDV1A0A1B0GX56 AL133215.2-201ENST00000609242 977 ntBASIC13.27□□□□□ -0.29
TRDV1A0A1B0GX56 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms