Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGC4Q9Y5F7 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGC4Q9Y5F7 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.22■□□□□ 0.03
PCDHGC4Q9Y5F7 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.22■□□□□ 0.03
PCDHGC4Q9Y5F7 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGC4Q9Y5F7 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDHGC4Q9Y5F7 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGC4Q9Y5F7 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDHGC4Q9Y5F7 CICP23-201ENST00000605013 2741 ntBASIC15.22■□□□□ 0.03
PCDHGC4Q9Y5F7 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.22■□□□□ 0.03
PCDHGC4Q9Y5F7 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGC4Q9Y5F7 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGC4Q9Y5F7 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGC4Q9Y5F7 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
PCDHGC4Q9Y5F7 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGC4Q9Y5F7 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PCDHGC4Q9Y5F7 CLUHP2-201ENST00000426660 1303 ntBASIC15.21■□□□□ 0.03
PCDHGC4Q9Y5F7 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.21■□□□□ 0.03
PCDHGC4Q9Y5F7 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGC4Q9Y5F7 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGC4Q9Y5F7 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PCDHGC4Q9Y5F7 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGC4Q9Y5F7 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
PCDHGC4Q9Y5F7 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDHGC4Q9Y5F7 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGC4Q9Y5F7 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGC4Q9Y5F7 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGC4Q9Y5F7 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGC4Q9Y5F7 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.21■□□□□ 0.03
PCDHGC4Q9Y5F7 MIR658-201ENST00000385210 100 ntBASIC15.21■□□□□ 0.03
PCDHGC4Q9Y5F7 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.21■□□□□ 0.03
PCDHGC4Q9Y5F7 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.21■□□□□ 0.03
PCDHGC4Q9Y5F7 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.21■□□□□ 0.03
PCDHGC4Q9Y5F7 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGC4Q9Y5F7 ATP5G2P4-201ENST00000442175 420 ntBASIC15.21■□□□□ 0.03
PCDHGC4Q9Y5F7 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
PCDHGC4Q9Y5F7 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.21■□□□□ 0.03
PCDHGC4Q9Y5F7 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDHGC4Q9Y5F7 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDHGC4Q9Y5F7 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.21■□□□□ 0.03
PCDHGC4Q9Y5F7 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGC4Q9Y5F7 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.21■□□□□ 0.03
PCDHGC4Q9Y5F7 AC138951.2-201ENST00000623455 1161 ntBASIC15.21■□□□□ 0.03
PCDHGC4Q9Y5F7 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGC4Q9Y5F7 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGC4Q9Y5F7 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGC4Q9Y5F7 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.21■□□□□ 0.03
PCDHGC4Q9Y5F7 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.21■□□□□ 0.03
PCDHGC4Q9Y5F7 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGC4Q9Y5F7 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PCDHGC4Q9Y5F7 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGC4Q9Y5F7 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGC4Q9Y5F7 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGC4Q9Y5F7 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
PCDHGC4Q9Y5F7 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.21■□□□□ 0.02
PCDHGC4Q9Y5F7 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PCDHGC4Q9Y5F7 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
PCDHGC4Q9Y5F7 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.21■□□□□ 0.02
PCDHGC4Q9Y5F7 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 AC018529.2-202ENST00000611482 3087 ntBASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 FGD5P1-202ENST00000614866 2498 ntBASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 AC119751.2-201ENST00000504529 210 ntBASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 MIR4259-201ENST00000584466 101 ntBASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGC4Q9Y5F7 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms