Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LINC00474Q9P2X8 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC9.95□□□□□ -0.82
LINC00474Q9P2X8 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC00474Q9P2X8 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC00474Q9P2X8 CICP23-201ENST00000605013 2741 ntBASIC9.95□□□□□ -0.82
LINC00474Q9P2X8 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC9.95□□□□□ -0.82
LINC00474Q9P2X8 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC00474Q9P2X8 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
LINC00474Q9P2X8 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
LINC00474Q9P2X8 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LINC00474Q9P2X8 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
LINC00474Q9P2X8 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 AC022532.1-201ENST00000624563 1728 ntBASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 NSL1-201ENST00000366976 722 ntTSL 2 BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 MPV17-208ENST00000405076 603 ntTSL 5 BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 AC074338.1-201ENST00000416825 156 ntBASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 OARD1-208ENST00000469104 704 ntTSL 2 BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 CD81-207ENST00000481687 890 ntTSL 2 BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 GREM1-201ENST00000560677 623 ntTSL 4 BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 COX11-202ENST00000571584 1108 ntTSL 2 BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 AC093813.1-201ENST00000605066 256 ntBASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 AC008761.3-201ENST00000624803 892 ntBASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 AF228730.6-201ENST00000641497 218 ntBASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 AC084121.3-201ENST00000641716 218 ntBASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 AC092127.1-201ENST00000567093 3455 ntBASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LINC00474Q9P2X8 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms