Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 CICP14-201ENST00000629111 2732 ntBASIC14.4□□□□□ -0.1
CCDC88CQ9P219 LRRC59-203ENST00000576448 1531 ntBASIC14.4□□□□□ -0.1
CCDC88CQ9P219 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 AC022494.1-201ENST00000466044 728 ntBASIC14.4□□□□□ -0.1
CCDC88CQ9P219 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 AC010328.2-201ENST00000597698 1111 ntBASIC14.4□□□□□ -0.1
CCDC88CQ9P219 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 AC138951.2-201ENST00000623455 1161 ntBASIC14.4□□□□□ -0.1
CCDC88CQ9P219 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC88CQ9P219 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.11
CCDC88CQ9P219 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 NOP2-211ENST00000540228 668 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 MIR6799-201ENST00000620297 69 ntBASIC14.39□□□□□ -0.11
CCDC88CQ9P219 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.39□□□□□ -0.11
CCDC88CQ9P219 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.39□□□□□ -0.11
CCDC88CQ9P219 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 AC092933.1-201ENST00000393644 945 ntBASIC14.39□□□□□ -0.11
CCDC88CQ9P219 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 FAM8A4P-201ENST00000435433 1213 ntBASIC14.39□□□□□ -0.11
CCDC88CQ9P219 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 AC073413.1-201ENST00000603927 732 ntBASIC14.39□□□□□ -0.11
CCDC88CQ9P219 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC88CQ9P219 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms