Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 CNN2P10-201ENST00000443067 918 ntBASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 ZACNP1-201ENST00000612259 710 ntBASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM248Q9NWD8 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TMEM248Q9NWD8 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.33■□□□□ 0.05
TMEM248Q9NWD8 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.33■□□□□ 0.05
TMEM248Q9NWD8 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TMEM248Q9NWD8 AC023824.1-201ENST00000562945 2975 ntBASIC15.33■□□□□ 0.05
TMEM248Q9NWD8 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TMEM248Q9NWD8 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.05
TMEM248Q9NWD8 AC067930.6-201ENST00000623257 4947 ntBASIC15.33■□□□□ 0.05
TMEM248Q9NWD8 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
TMEM248Q9NWD8 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
TMEM248Q9NWD8 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TMEM248Q9NWD8 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TMEM248Q9NWD8 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 AC009093.2-202ENST00000620513 2079 ntBASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 AL136309.1-201ENST00000403917 691 ntBASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 ALG3P1-201ENST00000508806 1114 ntBASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 GCOM2-201ENST00000509133 1104 ntBASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 DUX4L45-201ENST00000566406 1057 ntBASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 AL359881.2-201ENST00000602973 570 ntBASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM248Q9NWD8 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms