Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 AC092580.3-201ENST00000430932 139 ntBASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 AC241585.1-201ENST00000433527 519 ntBASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 LINC01225-203ENST00000563550 1244 ntBASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 AC004233.3-201ENST00000607794 1269 ntBASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 AC009118.2-201ENST00000613275 655 ntBASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 ST20-AS1-201ENST00000560255 4223 ntBASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.42□□□□□ -0.1
CCM2LQ9NUG4 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCM2LQ9NUG4 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCM2LQ9NUG4 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCM2LQ9NUG4 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCM2LQ9NUG4 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.42□□□□□ -0.1
CCM2LQ9NUG4 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CCM2LQ9NUG4 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCM2LQ9NUG4 TCAF1P1-201ENST00000414990 2232 ntBASIC14.42□□□□□ -0.1
CCM2LQ9NUG4 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.42□□□□□ -0.1
CCM2LQ9NUG4 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CCM2LQ9NUG4 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCM2LQ9NUG4 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
CCM2LQ9NUG4 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCM2LQ9NUG4 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCM2LQ9NUG4 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.42□□□□□ -0.1
CCM2LQ9NUG4 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCM2LQ9NUG4 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCM2LQ9NUG4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.42□□□□□ -0.1
CCM2LQ9NUG4 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CCM2LQ9NUG4 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.42□□□□□ -0.1
CCM2LQ9NUG4 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.42□□□□□ -0.1
CCM2LQ9NUG4 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.42□□□□□ -0.1
CCM2LQ9NUG4 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCM2LQ9NUG4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.42□□□□□ -0.1
CCM2LQ9NUG4 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCM2LQ9NUG4 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCM2LQ9NUG4 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCM2LQ9NUG4 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCM2LQ9NUG4 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
CCM2LQ9NUG4 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCM2LQ9NUG4 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCM2LQ9NUG4 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.42□□□□□ -0.1
CCM2LQ9NUG4 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCM2LQ9NUG4 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.42□□□□□ -0.1
CCM2LQ9NUG4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCM2LQ9NUG4 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.42□□□□□ -0.1
CCM2LQ9NUG4 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.42□□□□□ -0.1
CCM2LQ9NUG4 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.42□□□□□ -0.1
CCM2LQ9NUG4 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCM2LQ9NUG4 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCM2LQ9NUG4 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.42□□□□□ -0.1
CCM2LQ9NUG4 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCM2LQ9NUG4 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCM2LQ9NUG4 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CCM2LQ9NUG4 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms