Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 RNU1-114P-201ENST00000365297 166 ntBASIC13.25□□□□□ -0.29
CDH20Q9HBT6 ACKR1-201ENST00000368121 1240 ntBASIC13.25□□□□□ -0.29
CDH20Q9HBT6 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 NME2P1-201ENST00000426182 414 ntBASIC13.25□□□□□ -0.29
CDH20Q9HBT6 ACTG1P3-201ENST00000431775 1114 ntBASIC13.25□□□□□ -0.29
CDH20Q9HBT6 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 AL355864.2-201ENST00000447420 863 ntBASIC13.25□□□□□ -0.29
CDH20Q9HBT6 AC114812.1-204ENST00000449669 728 ntBASIC13.25□□□□□ -0.29
CDH20Q9HBT6 AC093433.1-201ENST00000458048 571 ntBASIC13.25□□□□□ -0.29
CDH20Q9HBT6 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 AC068587.3-201ENST00000526613 355 ntBASIC13.25□□□□□ -0.29
CDH20Q9HBT6 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.25□□□□□ -0.29
CDH20Q9HBT6 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDH20Q9HBT6 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.24□□□□□ -0.29
CDH20Q9HBT6 AL139094.1-201ENST00000405549 1188 ntBASIC13.24□□□□□ -0.29
CDH20Q9HBT6 BAATP1-201ENST00000412284 1225 ntBASIC13.24□□□□□ -0.29
CDH20Q9HBT6 KLF2P2-201ENST00000416807 1039 ntBASIC13.24□□□□□ -0.29
CDH20Q9HBT6 AC005034.1-201ENST00000426657 489 ntBASIC13.24□□□□□ -0.29
CDH20Q9HBT6 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 MIR5189-201ENST00000577370 114 ntBASIC13.24□□□□□ -0.29
CDH20Q9HBT6 AC132938.2-201ENST00000579188 680 ntBASIC13.24□□□□□ -0.29
CDH20Q9HBT6 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 AL591163.1-201ENST00000641757 987 ntBASIC13.24□□□□□ -0.29
CDH20Q9HBT6 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms