Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 RPS2P1-201ENST00000434010 821 ntBASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 HSPA8P5-201ENST00000456928 2069 ntBASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 OR7E14P-202ENST00000530490 1290 ntBASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 AC074044.1-201ENST00000609673 707 ntBASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 AC005593.1-201ENST00000624894 515 ntBASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 AC011498.7-201ENST00000624986 2027 ntBASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 AL022323.5-201ENST00000624101 2059 ntBASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 FAM220BP-201ENST00000377689 816 ntBASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SLIRPQ9GZT3 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLIRPQ9GZT3 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms