Protein–RNA interactions for Protein: Q9BY41

HDAC8, Histone deacetylase 8, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8Q9BY41 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 AGAP7P-201ENST00000582299 2062 ntBASIC14.86□□□□□ -0.03
HDAC8Q9BY41 AGAP14-201ENST00000624701 2060 ntBASIC14.86□□□□□ -0.03
HDAC8Q9BY41 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC8Q9BY41 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 AC091951.1-201ENST00000512854 2465 ntBASIC14.85□□□□□ -0.03
HDAC8Q9BY41 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 HYMAI-201ENST00000635591 3347 ntBASIC14.85□□□□□ -0.03
HDAC8Q9BY41 AC244394.1-201ENST00000435000 1665 ntBASIC14.85□□□□□ -0.03
HDAC8Q9BY41 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 CICP12-201ENST00000455801 843 ntBASIC14.85□□□□□ -0.03
HDAC8Q9BY41 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 HIST2H2BC-201ENST00000498492 580 ntBASIC14.85□□□□□ -0.03
HDAC8Q9BY41 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 AC013355.1-201ENST00000562625 723 ntBASIC14.85□□□□□ -0.03
HDAC8Q9BY41 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 AP000346.4-201ENST00000614827 381 ntBASIC14.85□□□□□ -0.03
HDAC8Q9BY41 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.85□□□□□ -0.03
HDAC8Q9BY41 AC068587.8-201ENST00000641239 219 ntBASIC14.85□□□□□ -0.03
HDAC8Q9BY41 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HDAC8Q9BY41 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
HDAC8Q9BY41 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.84□□□□□ -0.03
HDAC8Q9BY41 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
HDAC8Q9BY41 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HDAC8Q9BY41 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
HDAC8Q9BY41 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HDAC8Q9BY41 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HDAC8Q9BY41 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.84□□□□□ -0.03
HDAC8Q9BY41 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HDAC8Q9BY41 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
HDAC8Q9BY41 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HDAC8Q9BY41 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.84□□□□□ -0.03
HDAC8Q9BY41 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HDAC8Q9BY41 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.84□□□□□ -0.03
HDAC8Q9BY41 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
HDAC8Q9BY41 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HDAC8Q9BY41 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.84□□□□□ -0.03
HDAC8Q9BY41 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HDAC8Q9BY41 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.84□□□□□ -0.03
HDAC8Q9BY41 AC104073.2-201ENST00000453737 312 ntBASIC14.84□□□□□ -0.03
HDAC8Q9BY41 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HDAC8Q9BY41 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.84□□□□□ -0.03
HDAC8Q9BY41 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HDAC8Q9BY41 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.84□□□□□ -0.03
HDAC8Q9BY41 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.84□□□□□ -0.03
HDAC8Q9BY41 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC14.84□□□□□ -0.03
HDAC8Q9BY41 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.84□□□□□ -0.03
HDAC8Q9BY41 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.84□□□□□ -0.03
HDAC8Q9BY41 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.84□□□□□ -0.03
HDAC8Q9BY41 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.84□□□□□ -0.03
HDAC8Q9BY41 AC009884.2-201ENST00000603110 324 ntBASIC14.84□□□□□ -0.03
HDAC8Q9BY41 AL136295.7-201ENST00000619226 1200 ntBASIC14.84□□□□□ -0.03
HDAC8Q9BY41 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
HDAC8Q9BY41 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms