Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
RSPO3Q9BXY4 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.79□□□□□ -0.2
RSPO3Q9BXY4 MYADML-201ENST00000474610 2147 ntBASIC13.79□□□□□ -0.2
RSPO3Q9BXY4 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO3Q9BXY4 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO3Q9BXY4 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO3Q9BXY4 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO3Q9BXY4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO3Q9BXY4 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
RSPO3Q9BXY4 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RSPO3Q9BXY4 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 SALL4P5-201ENST00000419001 1760 ntBASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 AC131206.1-201ENST00000538078 1211 ntBASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 AP005019.2-201ENST00000615104 511 ntBASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 RN7SL832P-201ENST00000607781 1756 ntBASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 AC215219.1-201ENST00000400706 1817 ntBASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 AC020910.5-201ENST00000623668 1865 ntBASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO3Q9BXY4 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
RSPO3Q9BXY4 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
RSPO3Q9BXY4 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
RSPO3Q9BXY4 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.2
RSPO3Q9BXY4 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
RSPO3Q9BXY4 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
RSPO3Q9BXY4 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
RSPO3Q9BXY4 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO3Q9BXY4 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO3Q9BXY4 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO3Q9BXY4 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.77□□□□□ -0.21
RSPO3Q9BXY4 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO3Q9BXY4 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO3Q9BXY4 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
RSPO3Q9BXY4 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO3Q9BXY4 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO3Q9BXY4 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO3Q9BXY4 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO3Q9BXY4 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO3Q9BXY4 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
RSPO3Q9BXY4 SOCS2P1-201ENST00000417727 557 ntBASIC13.77□□□□□ -0.21
RSPO3Q9BXY4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.77□□□□□ -0.21
RSPO3Q9BXY4 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
RSPO3Q9BXY4 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.77□□□□□ -0.21
RSPO3Q9BXY4 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.77□□□□□ -0.21
RSPO3Q9BXY4 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.77□□□□□ -0.21
RSPO3Q9BXY4 FO681548.1-201ENST00000455617 1132 ntBASIC13.77□□□□□ -0.21
RSPO3Q9BXY4 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms