Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 AL844908.2-201ENST00000609461 460 ntBASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 AL590560.3-201ENST00000623350 461 ntBASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
CHRDL1Q9BU40 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
CHRDL1Q9BU40 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12.08□□□□□ -0.47
CHRDL1Q9BU40 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.08□□□□□ -0.47
CHRDL1Q9BU40 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.08□□□□□ -0.47
CHRDL1Q9BU40 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
CHRDL1Q9BU40 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.08□□□□□ -0.47
CHRDL1Q9BU40 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 RPL5P21-201ENST00000404620 815 ntBASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 AC015922.1-201ENST00000421102 1152 ntBASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHRDL1Q9BU40 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHRDL1Q9BU40 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.07□□□□□ -0.48
CHRDL1Q9BU40 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CHRDL1Q9BU40 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHRDL1Q9BU40 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.07□□□□□ -0.48
CHRDL1Q9BU40 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHRDL1Q9BU40 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
CHRDL1Q9BU40 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.07□□□□□ -0.48
CHRDL1Q9BU40 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
CHRDL1Q9BU40 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.07□□□□□ -0.48
CHRDL1Q9BU40 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHRDL1Q9BU40 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHRDL1Q9BU40 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHRDL1Q9BU40 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CHRDL1Q9BU40 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHRDL1Q9BU40 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHRDL1Q9BU40 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms