Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.33□□□□□ -0.12
TUBA1CQ9BQE3 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.33□□□□□ -0.12
TUBA1CQ9BQE3 SPDYE19P-201ENST00000338590 713 ntBASIC14.33□□□□□ -0.12
TUBA1CQ9BQE3 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
TUBA1CQ9BQE3 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.33□□□□□ -0.12
TUBA1CQ9BQE3 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.33□□□□□ -0.12
TUBA1CQ9BQE3 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.33□□□□□ -0.12
TUBA1CQ9BQE3 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.33□□□□□ -0.12
TUBA1CQ9BQE3 DOC2GP-202ENST00000514950 1163 ntBASIC14.33□□□□□ -0.12
TUBA1CQ9BQE3 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.33□□□□□ -0.12
TUBA1CQ9BQE3 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.33□□□□□ -0.12
TUBA1CQ9BQE3 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TUBA1CQ9BQE3 SPDYE22P-201ENST00000582158 798 ntBASIC14.33□□□□□ -0.12
TUBA1CQ9BQE3 AC004790.1-201ENST00000612686 536 ntBASIC14.33□□□□□ -0.12
TUBA1CQ9BQE3 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TUBA1CQ9BQE3 AC126335.2-201ENST00000623362 4637 ntBASIC14.33□□□□□ -0.12
TUBA1CQ9BQE3 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TUBA1CQ9BQE3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TUBA1CQ9BQE3 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TUBA1CQ9BQE3 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TUBA1CQ9BQE3 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TUBA1CQ9BQE3 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TUBA1CQ9BQE3 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TUBA1CQ9BQE3 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TUBA1CQ9BQE3 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TUBA1CQ9BQE3 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TUBA1CQ9BQE3 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.33□□□□□ -0.12
TUBA1CQ9BQE3 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TUBA1CQ9BQE3 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
TUBA1CQ9BQE3 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TUBA1CQ9BQE3 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.33□□□□□ -0.12
TUBA1CQ9BQE3 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.33□□□□□ -0.12
TUBA1CQ9BQE3 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TUBA1CQ9BQE3 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TUBA1CQ9BQE3 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TUBA1CQ9BQE3 AC134407.2-201ENST00000625089 1978 ntBASIC14.33□□□□□ -0.12
TUBA1CQ9BQE3 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TUBA1CQ9BQE3 KRT8P37-201ENST00000451609 1420 ntBASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 BNIP3P1-202ENST00000550043 1585 ntBASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 AC025048.3-201ENST00000590609 569 ntBASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 AC027307.3-201ENST00000594262 1100 ntBASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 AC005702.4-201ENST00000618393 416 ntBASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 AC015802.1-201ENST00000588104 1449 ntBASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.32□□□□□ -0.12
TUBA1CQ9BQE3 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TUBA1CQ9BQE3 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TUBA1CQ9BQE3 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TUBA1CQ9BQE3 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
TUBA1CQ9BQE3 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TUBA1CQ9BQE3 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TUBA1CQ9BQE3 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.31□□□□□ -0.12
TUBA1CQ9BQE3 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TUBA1CQ9BQE3 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.31□□□□□ -0.12
TUBA1CQ9BQE3 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TUBA1CQ9BQE3 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms