Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 AL121723.1-201ENST00000445194 1519 ntBASIC11.52□□□□□ -0.57
VGLL1Q99990 MPI-203ENST00000535694 1523 ntTSL 2 BASIC11.52□□□□□ -0.57
VGLL1Q99990 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VGLL1Q99990 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VGLL1Q99990 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VGLL1Q99990 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC11.52□□□□□ -0.57
VGLL1Q99990 AC104457.1-201ENST00000401024 814 ntBASIC11.52□□□□□ -0.57
VGLL1Q99990 COX10-202ENST00000429152 875 ntTSL 2 BASIC11.52□□□□□ -0.57
VGLL1Q99990 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VGLL1Q99990 RPL13P2-201ENST00000440687 659 ntBASIC11.52□□□□□ -0.57
VGLL1Q99990 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
VGLL1Q99990 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC11.52□□□□□ -0.57
VGLL1Q99990 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC11.52□□□□□ -0.57
VGLL1Q99990 SATB1-217ENST00000493952 626 ntTSL 3 BASIC11.52□□□□□ -0.57
VGLL1Q99990 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC11.52□□□□□ -0.57
VGLL1Q99990 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
VGLL1Q99990 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC11.52□□□□□ -0.57
VGLL1Q99990 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VGLL1Q99990 AL645728.2-202ENST00000641679 227 ntBASIC11.52□□□□□ -0.57
VGLL1Q99990 AC006504.5-208ENST00000588784 2401 ntBASIC11.52□□□□□ -0.57
VGLL1Q99990 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VGLL1Q99990 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC11.52□□□□□ -0.57
VGLL1Q99990 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
VGLL1Q99990 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VGLL1Q99990 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
VGLL1Q99990 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VGLL1Q99990 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC11.52□□□□□ -0.57
VGLL1Q99990 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC11.52□□□□□ -0.57
VGLL1Q99990 SRC-202ENST00000373558 4304 ntTSL 5 BASIC11.52□□□□□ -0.57
VGLL1Q99990 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VGLL1Q99990 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VGLL1Q99990 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VGLL1Q99990 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
VGLL1Q99990 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC11.52□□□□□ -0.57
VGLL1Q99990 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
VGLL1Q99990 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VGLL1Q99990 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
VGLL1Q99990 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VGLL1Q99990 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
VGLL1Q99990 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
VGLL1Q99990 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VGLL1Q99990 AC138969.3-201ENST00000546612 1459 ntBASIC11.51□□□□□ -0.57
VGLL1Q99990 AC138932.2-201ENST00000548268 1459 ntBASIC11.51□□□□□ -0.57
VGLL1Q99990 AC126755.4-201ENST00000549796 1459 ntBASIC11.51□□□□□ -0.57
VGLL1Q99990 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VGLL1Q99990 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
VGLL1Q99990 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VGLL1Q99990 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
VGLL1Q99990 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VGLL1Q99990 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VGLL1Q99990 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VGLL1Q99990 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC11.51□□□□□ -0.57
VGLL1Q99990 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC11.51□□□□□ -0.57
VGLL1Q99990 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
VGLL1Q99990 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VGLL1Q99990 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC11.51□□□□□ -0.57
VGLL1Q99990 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC11.51□□□□□ -0.57
VGLL1Q99990 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VGLL1Q99990 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VGLL1Q99990 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VGLL1Q99990 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
VGLL1Q99990 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VGLL1Q99990 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VGLL1Q99990 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC11.51□□□□□ -0.57
VGLL1Q99990 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VGLL1Q99990 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VGLL1Q99990 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC11.51□□□□□ -0.57
VGLL1Q99990 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
VGLL1Q99990 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC11.51□□□□□ -0.57
VGLL1Q99990 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VGLL1Q99990 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VGLL1Q99990 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC11.51□□□□□ -0.57
VGLL1Q99990 RPL37AP1-201ENST00000412502 279 ntBASIC11.51□□□□□ -0.57
VGLL1Q99990 SPDYE7P-202ENST00000420373 878 ntBASIC11.51□□□□□ -0.57
VGLL1Q99990 BX842568.4-201ENST00000421222 227 ntBASIC11.51□□□□□ -0.57
VGLL1Q99990 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VGLL1Q99990 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC11.51□□□□□ -0.57
VGLL1Q99990 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
VGLL1Q99990 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC11.51□□□□□ -0.57
VGLL1Q99990 AC023141.5-201ENST00000458585 616 ntBASIC11.51□□□□□ -0.57
VGLL1Q99990 KRT18P43-201ENST00000469825 1281 ntBASIC11.51□□□□□ -0.57
VGLL1Q99990 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VGLL1Q99990 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC11.51□□□□□ -0.57
VGLL1Q99990 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC11.51□□□□□ -0.57
VGLL1Q99990 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VGLL1Q99990 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC11.51□□□□□ -0.57
VGLL1Q99990 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC11.51□□□□□ -0.57
VGLL1Q99990 MIR3687-2-201ENST00000577708 61 ntBASIC11.51□□□□□ -0.57
VGLL1Q99990 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC11.51□□□□□ -0.57
VGLL1Q99990 MIR3687-1-201ENST00000614492 61 ntBASIC11.51□□□□□ -0.57
VGLL1Q99990 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
VGLL1Q99990 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC11.51□□□□□ -0.57
VGLL1Q99990 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC11.51□□□□□ -0.57
VGLL1Q99990 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC11.51□□□□□ -0.57
VGLL1Q99990 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
VGLL1Q99990 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VGLL1Q99990 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC11.51□□□□□ -0.57
VGLL1Q99990 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VGLL1Q99990 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VGLL1Q99990 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms