Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CDK5RAP1Q96SZ6 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CDK5RAP1Q96SZ6 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.62■□□□□ 0.09
CDK5RAP1Q96SZ6 AP003171.2-201ENST00000528208 925 ntBASIC15.62■□□□□ 0.09
CDK5RAP1Q96SZ6 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.62■□□□□ 0.09
CDK5RAP1Q96SZ6 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.62■□□□□ 0.09
CDK5RAP1Q96SZ6 AC091271.1-201ENST00000611877 1162 ntBASIC15.62■□□□□ 0.09
CDK5RAP1Q96SZ6 KRT8P4-201ENST00000509735 1454 ntBASIC15.62■□□□□ 0.09
CDK5RAP1Q96SZ6 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CDK5RAP1Q96SZ6 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDK5RAP1Q96SZ6 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDK5RAP1Q96SZ6 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDK5RAP1Q96SZ6 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDK5RAP1Q96SZ6 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDK5RAP1Q96SZ6 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CDK5RAP1Q96SZ6 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.62■□□□□ 0.09
CDK5RAP1Q96SZ6 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDK5RAP1Q96SZ6 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.62■□□□□ 0.09
CDK5RAP1Q96SZ6 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 CHMP1AP1-201ENST00000445563 662 ntBASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 AC023090.2-201ENST00000625182 2110 ntBASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDK5RAP1Q96SZ6 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.6■□□□□ 0.09
CDK5RAP1Q96SZ6 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDK5RAP1Q96SZ6 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDK5RAP1Q96SZ6 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.6■□□□□ 0.09
CDK5RAP1Q96SZ6 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDK5RAP1Q96SZ6 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDK5RAP1Q96SZ6 AC003102.2-201ENST00000589195 1469 ntBASIC15.6■□□□□ 0.09
CDK5RAP1Q96SZ6 SALL4P5-201ENST00000419001 1760 ntBASIC15.6■□□□□ 0.09
CDK5RAP1Q96SZ6 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDK5RAP1Q96SZ6 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDK5RAP1Q96SZ6 AC011840.2-201ENST00000563063 1520 ntBASIC15.6■□□□□ 0.09
CDK5RAP1Q96SZ6 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDK5RAP1Q96SZ6 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDK5RAP1Q96SZ6 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.6■□□□□ 0.09
CDK5RAP1Q96SZ6 FAM86MP-201ENST00000340703 885 ntBASIC15.6■□□□□ 0.09
CDK5RAP1Q96SZ6 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.6■□□□□ 0.09
CDK5RAP1Q96SZ6 GOLGA2P4-201ENST00000441462 777 ntBASIC15.6■□□□□ 0.09
CDK5RAP1Q96SZ6 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDK5RAP1Q96SZ6 ALG3P1-201ENST00000508806 1114 ntBASIC15.6■□□□□ 0.09
CDK5RAP1Q96SZ6 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.6■□□□□ 0.09
CDK5RAP1Q96SZ6 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
CDK5RAP1Q96SZ6 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.6■□□□□ 0.09
CDK5RAP1Q96SZ6 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.6■□□□□ 0.09
CDK5RAP1Q96SZ6 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.6■□□□□ 0.09
CDK5RAP1Q96SZ6 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.6■□□□□ 0.09
CDK5RAP1Q96SZ6 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.6■□□□□ 0.09
CDK5RAP1Q96SZ6 AC008825.2-201ENST00000603374 718 ntBASIC15.6■□□□□ 0.09
CDK5RAP1Q96SZ6 AC002472.3-201ENST00000640124 621 ntBASIC15.6■□□□□ 0.09
CDK5RAP1Q96SZ6 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CDK5RAP1Q96SZ6 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDK5RAP1Q96SZ6 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDK5RAP1Q96SZ6 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDK5RAP1Q96SZ6 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CDK5RAP1Q96SZ6 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms