Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.55□□□□□ -0.08
VMP1Q96GC9 AC015910.1-201ENST00000579400 975 ntBASIC14.55□□□□□ -0.08
VMP1Q96GC9 AC000095.1-201ENST00000603208 874 ntBASIC14.55□□□□□ -0.08
VMP1Q96GC9 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VMP1Q96GC9 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VMP1Q96GC9 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VMP1Q96GC9 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.55□□□□□ -0.08
VMP1Q96GC9 AJ011931.1-201ENST00000618749 2492 ntBASIC14.55□□□□□ -0.08
VMP1Q96GC9 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
VMP1Q96GC9 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VMP1Q96GC9 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VMP1Q96GC9 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VMP1Q96GC9 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
VMP1Q96GC9 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VMP1Q96GC9 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VMP1Q96GC9 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VMP1Q96GC9 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
VMP1Q96GC9 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VMP1Q96GC9 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VMP1Q96GC9 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VMP1Q96GC9 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
VMP1Q96GC9 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VMP1Q96GC9 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.54□□□□□ -0.08
VMP1Q96GC9 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.54□□□□□ -0.08
VMP1Q96GC9 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VMP1Q96GC9 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VMP1Q96GC9 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VMP1Q96GC9 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VMP1Q96GC9 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.54□□□□□ -0.08
VMP1Q96GC9 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VMP1Q96GC9 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
VMP1Q96GC9 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VMP1Q96GC9 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VMP1Q96GC9 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.54□□□□□ -0.08
VMP1Q96GC9 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
VMP1Q96GC9 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.54□□□□□ -0.08
VMP1Q96GC9 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.54□□□□□ -0.08
VMP1Q96GC9 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
VMP1Q96GC9 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.54□□□□□ -0.08
VMP1Q96GC9 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.54□□□□□ -0.08
VMP1Q96GC9 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
VMP1Q96GC9 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VMP1Q96GC9 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VMP1Q96GC9 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VMP1Q96GC9 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.54□□□□□ -0.08
VMP1Q96GC9 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.54□□□□□ -0.08
VMP1Q96GC9 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.54□□□□□ -0.08
VMP1Q96GC9 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.54□□□□□ -0.08
VMP1Q96GC9 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.54□□□□□ -0.08
VMP1Q96GC9 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.54□□□□□ -0.08
VMP1Q96GC9 CU639417.3-201ENST00000624240 1404 ntBASIC14.54□□□□□ -0.08
VMP1Q96GC9 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
VMP1Q96GC9 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VMP1Q96GC9 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VMP1Q96GC9 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VMP1Q96GC9 AC148477.4-201ENST00000613430 1793 ntBASIC14.54□□□□□ -0.08
VMP1Q96GC9 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
VMP1Q96GC9 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
VMP1Q96GC9 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VMP1Q96GC9 REXO1L2P-201ENST00000425429 2069 ntBASIC14.54□□□□□ -0.08
VMP1Q96GC9 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.54□□□□□ -0.08
VMP1Q96GC9 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
VMP1Q96GC9 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.54□□□□□ -0.08
VMP1Q96GC9 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
VMP1Q96GC9 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.54□□□□□ -0.08
VMP1Q96GC9 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VMP1Q96GC9 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VMP1Q96GC9 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
VMP1Q96GC9 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.54□□□□□ -0.08
VMP1Q96GC9 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VMP1Q96GC9 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VMP1Q96GC9 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VMP1Q96GC9 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
VMP1Q96GC9 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
VMP1Q96GC9 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VMP1Q96GC9 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.53□□□□□ -0.08
VMP1Q96GC9 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VMP1Q96GC9 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VMP1Q96GC9 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
VMP1Q96GC9 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VMP1Q96GC9 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VMP1Q96GC9 AC105250.1-201ENST00000509378 2057 ntBASIC14.53□□□□□ -0.08
VMP1Q96GC9 AC138969.2-201ENST00000532739 9932 ntBASIC14.53□□□□□ -0.08
VMP1Q96GC9 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
VMP1Q96GC9 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VMP1Q96GC9 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
VMP1Q96GC9 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VMP1Q96GC9 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
VMP1Q96GC9 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VMP1Q96GC9 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
VMP1Q96GC9 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VMP1Q96GC9 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VMP1Q96GC9 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VMP1Q96GC9 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VMP1Q96GC9 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VMP1Q96GC9 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VMP1Q96GC9 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
VMP1Q96GC9 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VMP1Q96GC9 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
VMP1Q96GC9 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms