Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.32■□□□□ 0.2
PGBD4Q96DM1 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.32■□□□□ 0.2
PGBD4Q96DM1 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PGBD4Q96DM1 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
PGBD4Q96DM1 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
PGBD4Q96DM1 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.31■□□□□ 0.2
PGBD4Q96DM1 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.31■□□□□ 0.2
PGBD4Q96DM1 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PGBD4Q96DM1 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PGBD4Q96DM1 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PGBD4Q96DM1 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PGBD4Q96DM1 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PGBD4Q96DM1 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.31■□□□□ 0.2
PGBD4Q96DM1 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PGBD4Q96DM1 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PGBD4Q96DM1 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PGBD4Q96DM1 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PGBD4Q96DM1 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PGBD4Q96DM1 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PGBD4Q96DM1 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PGBD4Q96DM1 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.31■□□□□ 0.2
PGBD4Q96DM1 FNTAP2-201ENST00000430308 634 ntBASIC16.31■□□□□ 0.2
PGBD4Q96DM1 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC16.31■□□□□ 0.2
PGBD4Q96DM1 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.31■□□□□ 0.2
PGBD4Q96DM1 BX284668.4-201ENST00000453917 508 ntBASIC16.31■□□□□ 0.2
PGBD4Q96DM1 AC021723.1-201ENST00000486306 515 ntBASIC16.31■□□□□ 0.2
PGBD4Q96DM1 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC16.31■□□□□ 0.2
PGBD4Q96DM1 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PGBD4Q96DM1 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.31■□□□□ 0.2
PGBD4Q96DM1 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC16.31■□□□□ 0.2
PGBD4Q96DM1 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC16.31■□□□□ 0.2
PGBD4Q96DM1 AL023803.2-201ENST00000620080 638 ntBASIC16.31■□□□□ 0.2
PGBD4Q96DM1 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PGBD4Q96DM1 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PGBD4Q96DM1 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PGBD4Q96DM1 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PGBD4Q96DM1 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.31■□□□□ 0.2
PGBD4Q96DM1 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PGBD4Q96DM1 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PGBD4Q96DM1 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.31■□□□□ 0.2
PGBD4Q96DM1 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.31■□□□□ 0.2
PGBD4Q96DM1 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.31■□□□□ 0.2
PGBD4Q96DM1 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.31■□□□□ 0.2
PGBD4Q96DM1 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.31■□□□□ 0.2
PGBD4Q96DM1 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PGBD4Q96DM1 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PGBD4Q96DM1 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PGBD4Q96DM1 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.3■□□□□ 0.2
PGBD4Q96DM1 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.3■□□□□ 0.2
PGBD4Q96DM1 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.3■□□□□ 0.2
PGBD4Q96DM1 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PGBD4Q96DM1 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PGBD4Q96DM1 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
PGBD4Q96DM1 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.3■□□□□ 0.2
PGBD4Q96DM1 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.3■□□□□ 0.2
PGBD4Q96DM1 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.3■□□□□ 0.2
PGBD4Q96DM1 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PGBD4Q96DM1 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.3■□□□□ 0.2
PGBD4Q96DM1 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PGBD4Q96DM1 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PGBD4Q96DM1 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PGBD4Q96DM1 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PGBD4Q96DM1 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.3■□□□□ 0.2
PGBD4Q96DM1 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PGBD4Q96DM1 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC16.3■□□□□ 0.2
PGBD4Q96DM1 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PGBD4Q96DM1 RN7SKP175-201ENST00000408472 289 ntBASIC16.3■□□□□ 0.2
PGBD4Q96DM1 SERPINA13P-202ENST00000478994 924 ntBASIC16.3■□□□□ 0.2
PGBD4Q96DM1 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.3■□□□□ 0.2
PGBD4Q96DM1 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PGBD4Q96DM1 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.3■□□□□ 0.2
PGBD4Q96DM1 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC16.3■□□□□ 0.2
PGBD4Q96DM1 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.3■□□□□ 0.2
PGBD4Q96DM1 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC16.3■□□□□ 0.2
PGBD4Q96DM1 AC002472.3-201ENST00000640124 621 ntBASIC16.3■□□□□ 0.2
PGBD4Q96DM1 AC068587.10-201ENST00000641210 219 ntBASIC16.3■□□□□ 0.2
PGBD4Q96DM1 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PGBD4Q96DM1 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PGBD4Q96DM1 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PGBD4Q96DM1 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PGBD4Q96DM1 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.3■□□□□ 0.2
PGBD4Q96DM1 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PGBD4Q96DM1 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.3■□□□□ 0.2
PGBD4Q96DM1 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.3■□□□□ 0.2
PGBD4Q96DM1 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PGBD4Q96DM1 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PGBD4Q96DM1 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PGBD4Q96DM1 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PGBD4Q96DM1 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PGBD4Q96DM1 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PGBD4Q96DM1 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.3■□□□□ 0.2
PGBD4Q96DM1 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PGBD4Q96DM1 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.29■□□□□ 0.2
PGBD4Q96DM1 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PGBD4Q96DM1 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PGBD4Q96DM1 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PGBD4Q96DM1 KRT8P29-201ENST00000420409 1371 ntBASIC16.29■□□□□ 0.2
PGBD4Q96DM1 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.29■□□□□ 0.2
PGBD4Q96DM1 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.29■□□□□ 0.2
PGBD4Q96DM1 AC126177.1-201ENST00000547829 2218 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms