Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CNOT9Q92600 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CNOT9Q92600 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CNOT9Q92600 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CNOT9Q92600 AL645937.2-201ENST00000396808 931 ntBASIC13.96□□□□□ -0.17
CNOT9Q92600 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.96□□□□□ -0.17
CNOT9Q92600 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.96□□□□□ -0.17
CNOT9Q92600 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.96□□□□□ -0.17
CNOT9Q92600 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.96□□□□□ -0.17
CNOT9Q92600 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CNOT9Q92600 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CNOT9Q92600 SPCS2P1-201ENST00000561636 679 ntBASIC13.96□□□□□ -0.17
CNOT9Q92600 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.96□□□□□ -0.17
CNOT9Q92600 AC124283.3-201ENST00000570869 594 ntBASIC13.96□□□□□ -0.17
CNOT9Q92600 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.96□□□□□ -0.17
CNOT9Q92600 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.96□□□□□ -0.17
CNOT9Q92600 AL096865.1-201ENST00000606796 927 ntBASIC13.96□□□□□ -0.17
CNOT9Q92600 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CNOT9Q92600 AC007431.3-201ENST00000623221 587 ntBASIC13.96□□□□□ -0.17
CNOT9Q92600 BX539320.1-201ENST00000623759 877 ntBASIC13.96□□□□□ -0.17
CNOT9Q92600 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CNOT9Q92600 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CNOT9Q92600 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CNOT9Q92600 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CNOT9Q92600 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CNOT9Q92600 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CNOT9Q92600 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CNOT9Q92600 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CNOT9Q92600 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
CNOT9Q92600 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
CNOT9Q92600 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CNOT9Q92600 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.96□□□□□ -0.18
CNOT9Q92600 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CNOT9Q92600 AC140479.7-201ENST00000636301 2332 ntBASIC13.96□□□□□ -0.18
CNOT9Q92600 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
CNOT9Q92600 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
CNOT9Q92600 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
CNOT9Q92600 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CNOT9Q92600 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.95□□□□□ -0.18
CNOT9Q92600 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT9Q92600 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT9Q92600 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.95□□□□□ -0.18
CNOT9Q92600 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.95□□□□□ -0.18
CNOT9Q92600 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT9Q92600 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
CNOT9Q92600 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.95□□□□□ -0.18
CNOT9Q92600 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT9Q92600 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.95□□□□□ -0.18
CNOT9Q92600 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CNOT9Q92600 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT9Q92600 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT9Q92600 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT9Q92600 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.95□□□□□ -0.18
CNOT9Q92600 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT9Q92600 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT9Q92600 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.95□□□□□ -0.18
CNOT9Q92600 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CNOT9Q92600 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.95□□□□□ -0.18
CNOT9Q92600 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT9Q92600 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT9Q92600 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.95□□□□□ -0.18
CNOT9Q92600 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT9Q92600 AL442647.2-201ENST00000429864 857 ntBASIC13.95□□□□□ -0.18
CNOT9Q92600 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.95□□□□□ -0.18
CNOT9Q92600 FAM207CP-201ENST00000443486 507 ntBASIC13.95□□□□□ -0.18
CNOT9Q92600 MYCLP2-201ENST00000449268 967 ntBASIC13.95□□□□□ -0.18
CNOT9Q92600 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.95□□□□□ -0.18
CNOT9Q92600 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.95□□□□□ -0.18
CNOT9Q92600 AP001582.1-201ENST00000525856 295 ntBASIC13.95□□□□□ -0.18
CNOT9Q92600 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.95□□□□□ -0.18
CNOT9Q92600 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.95□□□□□ -0.18
CNOT9Q92600 AC008761.3-201ENST00000624803 892 ntBASIC13.95□□□□□ -0.18
CNOT9Q92600 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CNOT9Q92600 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT9Q92600 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT9Q92600 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT9Q92600 KRT8P22-201ENST00000562317 1415 ntBASIC13.95□□□□□ -0.18
CNOT9Q92600 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CNOT9Q92600 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.95□□□□□ -0.18
CNOT9Q92600 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CNOT9Q92600 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT9Q92600 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT9Q92600 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CNOT9Q92600 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CNOT9Q92600 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CNOT9Q92600 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT9Q92600 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.95□□□□□ -0.18
CNOT9Q92600 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.95□□□□□ -0.18
CNOT9Q92600 AL391825.1-201ENST00000457671 1364 ntBASIC13.95□□□□□ -0.18
CNOT9Q92600 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.95□□□□□ -0.18
CNOT9Q92600 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.95□□□□□ -0.18
CNOT9Q92600 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CNOT9Q92600 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.95□□□□□ -0.18
CNOT9Q92600 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CNOT9Q92600 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.94□□□□□ -0.18
CNOT9Q92600 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CNOT9Q92600 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
CNOT9Q92600 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.94□□□□□ -0.18
CNOT9Q92600 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CNOT9Q92600 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms