Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.94□□□□□ -0.18
CT55Q8WUE5 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC13.94□□□□□ -0.18
CT55Q8WUE5 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CT55Q8WUE5 AC009884.2-201ENST00000603110 324 ntBASIC13.94□□□□□ -0.18
CT55Q8WUE5 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC13.94□□□□□ -0.18
CT55Q8WUE5 MIR6720-201ENST00000611664 98 ntBASIC13.94□□□□□ -0.18
CT55Q8WUE5 AF254983.2-201ENST00000612331 135 ntBASIC13.94□□□□□ -0.18
CT55Q8WUE5 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.94□□□□□ -0.18
CT55Q8WUE5 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CT55Q8WUE5 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CT55Q8WUE5 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
CT55Q8WUE5 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CT55Q8WUE5 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CT55Q8WUE5 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.94□□□□□ -0.18
CT55Q8WUE5 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CT55Q8WUE5 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CT55Q8WUE5 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.94□□□□□ -0.18
CT55Q8WUE5 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC13.94□□□□□ -0.18
CT55Q8WUE5 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CT55Q8WUE5 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CT55Q8WUE5 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.94□□□□□ -0.18
CT55Q8WUE5 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CT55Q8WUE5 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CT55Q8WUE5 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CT55Q8WUE5 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.93□□□□□ -0.18
CT55Q8WUE5 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC13.93□□□□□ -0.18
CT55Q8WUE5 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CT55Q8WUE5 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CT55Q8WUE5 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CT55Q8WUE5 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CT55Q8WUE5 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CT55Q8WUE5 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CT55Q8WUE5 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CT55Q8WUE5 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CT55Q8WUE5 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CT55Q8WUE5 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CT55Q8WUE5 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CT55Q8WUE5 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CT55Q8WUE5 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CT55Q8WUE5 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CT55Q8WUE5 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC13.93□□□□□ -0.18
CT55Q8WUE5 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CT55Q8WUE5 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC13.93□□□□□ -0.18
CT55Q8WUE5 AC006335.1-201ENST00000445200 547 ntBASIC13.93□□□□□ -0.18
CT55Q8WUE5 AL596276.2-201ENST00000447525 331 ntBASIC13.93□□□□□ -0.18
CT55Q8WUE5 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.93□□□□□ -0.18
CT55Q8WUE5 TMEM198B-204ENST00000484016 896 ntBASIC13.93□□□□□ -0.18
CT55Q8WUE5 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC13.93□□□□□ -0.18
CT55Q8WUE5 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CT55Q8WUE5 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CT55Q8WUE5 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CT55Q8WUE5 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC13.93□□□□□ -0.18
CT55Q8WUE5 CENPX-208ENST00000584347 799 ntTSL 2 BASIC13.93□□□□□ -0.18
CT55Q8WUE5 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC13.93□□□□□ -0.18
CT55Q8WUE5 AC020922.3-201ENST00000595064 547 ntBASIC13.93□□□□□ -0.18
CT55Q8WUE5 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CT55Q8WUE5 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC13.93□□□□□ -0.18
CT55Q8WUE5 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC13.93□□□□□ -0.18
CT55Q8WUE5 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC13.93□□□□□ -0.18
CT55Q8WUE5 Z98259.2-201ENST00000641583 609 ntBASIC13.93□□□□□ -0.18
CT55Q8WUE5 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CT55Q8WUE5 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
CT55Q8WUE5 AC126365.1-201ENST00000578585 1514 ntBASIC13.93□□□□□ -0.18
CT55Q8WUE5 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.93□□□□□ -0.18
CT55Q8WUE5 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CT55Q8WUE5 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CT55Q8WUE5 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CT55Q8WUE5 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CT55Q8WUE5 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CT55Q8WUE5 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC13.93□□□□□ -0.18
CT55Q8WUE5 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CT55Q8WUE5 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CT55Q8WUE5 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CT55Q8WUE5 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.93□□□□□ -0.18
CT55Q8WUE5 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CT55Q8WUE5 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CT55Q8WUE5 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CT55Q8WUE5 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
CT55Q8WUE5 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.92□□□□□ -0.18
CT55Q8WUE5 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CT55Q8WUE5 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.92□□□□□ -0.18
CT55Q8WUE5 AC136621.1-201ENST00000624017 2304 ntBASIC13.92□□□□□ -0.18
CT55Q8WUE5 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CT55Q8WUE5 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.92□□□□□ -0.18
CT55Q8WUE5 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CT55Q8WUE5 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.92□□□□□ -0.18
CT55Q8WUE5 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.92□□□□□ -0.18
CT55Q8WUE5 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CT55Q8WUE5 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
CT55Q8WUE5 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CT55Q8WUE5 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CT55Q8WUE5 FXNP2-201ENST00000411625 547 ntBASIC13.92□□□□□ -0.18
CT55Q8WUE5 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.92□□□□□ -0.18
CT55Q8WUE5 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CT55Q8WUE5 MAGEA5-201ENST00000446757 942 ntBASIC13.92□□□□□ -0.18
CT55Q8WUE5 EEF1DP6-201ENST00000449232 372 ntBASIC13.92□□□□□ -0.18
CT55Q8WUE5 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC13.92□□□□□ -0.18
CT55Q8WUE5 CICP12-201ENST00000455801 843 ntBASIC13.92□□□□□ -0.18
CT55Q8WUE5 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC13.92□□□□□ -0.18
CT55Q8WUE5 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms