Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEDD1Q8NHV4 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NEDD1Q8NHV4 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEDD1Q8NHV4 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEDD1Q8NHV4 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC17.42■□□□□ 0.38
NEDD1Q8NHV4 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEDD1Q8NHV4 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.42■□□□□ 0.38
NEDD1Q8NHV4 NKAIN1P1-201ENST00000435754 582 ntBASIC17.42■□□□□ 0.38
NEDD1Q8NHV4 CICP12-201ENST00000455801 843 ntBASIC17.42■□□□□ 0.38
NEDD1Q8NHV4 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.42■□□□□ 0.38
NEDD1Q8NHV4 AC021723.1-201ENST00000486306 515 ntBASIC17.42■□□□□ 0.38
NEDD1Q8NHV4 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
NEDD1Q8NHV4 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
NEDD1Q8NHV4 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NEDD1Q8NHV4 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC17.42■□□□□ 0.38
NEDD1Q8NHV4 BNIP3P13-201ENST00000599968 566 ntBASIC17.42■□□□□ 0.38
NEDD1Q8NHV4 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEDD1Q8NHV4 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
NEDD1Q8NHV4 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEDD1Q8NHV4 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
NEDD1Q8NHV4 AC013726.1-201ENST00000563747 2285 ntBASIC17.42■□□□□ 0.38
NEDD1Q8NHV4 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.42■□□□□ 0.38
NEDD1Q8NHV4 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEDD1Q8NHV4 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
NEDD1Q8NHV4 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NEDD1Q8NHV4 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC17.42■□□□□ 0.38
NEDD1Q8NHV4 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEDD1Q8NHV4 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEDD1Q8NHV4 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.42■□□□□ 0.38
NEDD1Q8NHV4 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEDD1Q8NHV4 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC17.42■□□□□ 0.38
NEDD1Q8NHV4 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
NEDD1Q8NHV4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
NEDD1Q8NHV4 AC018442.1-201ENST00000421439 2061 ntBASIC17.41■□□□□ 0.38
NEDD1Q8NHV4 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NEDD1Q8NHV4 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NEDD1Q8NHV4 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
NEDD1Q8NHV4 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
NEDD1Q8NHV4 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NEDD1Q8NHV4 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NEDD1Q8NHV4 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NEDD1Q8NHV4 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NEDD1Q8NHV4 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
NEDD1Q8NHV4 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NEDD1Q8NHV4 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NEDD1Q8NHV4 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC17.41■□□□□ 0.38
NEDD1Q8NHV4 KLF2P1-201ENST00000447438 1042 ntBASIC17.41■□□□□ 0.38
NEDD1Q8NHV4 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC17.41■□□□□ 0.38
NEDD1Q8NHV4 RNMTL1P1-201ENST00000454103 560 ntBASIC17.41■□□□□ 0.38
NEDD1Q8NHV4 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.41■□□□□ 0.38
NEDD1Q8NHV4 AC044849.1-201ENST00000519737 1188 ntBASIC17.41■□□□□ 0.38
NEDD1Q8NHV4 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.41■□□□□ 0.38
NEDD1Q8NHV4 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
NEDD1Q8NHV4 AC027601.3-201ENST00000622907 509 ntBASIC17.41■□□□□ 0.38
NEDD1Q8NHV4 AC244452.3-201ENST00000636814 210 ntBASIC17.41■□□□□ 0.38
NEDD1Q8NHV4 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NEDD1Q8NHV4 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
NEDD1Q8NHV4 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NEDD1Q8NHV4 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NEDD1Q8NHV4 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NEDD1Q8NHV4 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
NEDD1Q8NHV4 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NEDD1Q8NHV4 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
NEDD1Q8NHV4 MRPL37P1-201ENST00000592451 1337 ntBASIC17.41■□□□□ 0.38
NEDD1Q8NHV4 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC17.41■□□□□ 0.38
NEDD1Q8NHV4 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NEDD1Q8NHV4 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.41■□□□□ 0.38
NEDD1Q8NHV4 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NEDD1Q8NHV4 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC17.41■□□□□ 0.38
NEDD1Q8NHV4 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NEDD1Q8NHV4 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NEDD1Q8NHV4 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NEDD1Q8NHV4 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NEDD1Q8NHV4 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC17.4■□□□□ 0.38
NEDD1Q8NHV4 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NEDD1Q8NHV4 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NEDD1Q8NHV4 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NEDD1Q8NHV4 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NEDD1Q8NHV4 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
NEDD1Q8NHV4 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NEDD1Q8NHV4 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
NEDD1Q8NHV4 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NEDD1Q8NHV4 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
NEDD1Q8NHV4 AC244394.1-201ENST00000435000 1665 ntBASIC17.4■□□□□ 0.38
NEDD1Q8NHV4 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NEDD1Q8NHV4 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NEDD1Q8NHV4 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NEDD1Q8NHV4 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NEDD1Q8NHV4 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NEDD1Q8NHV4 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NEDD1Q8NHV4 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.4■□□□□ 0.38
NEDD1Q8NHV4 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.4■□□□□ 0.38
NEDD1Q8NHV4 DPM3-202ENST00000368399 517 ntBASIC17.4■□□□□ 0.38
NEDD1Q8NHV4 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC17.4■□□□□ 0.38
NEDD1Q8NHV4 FAM58BP-201ENST00000439056 645 ntBASIC17.4■□□□□ 0.38
NEDD1Q8NHV4 BX284668.4-201ENST00000453917 508 ntBASIC17.4■□□□□ 0.38
NEDD1Q8NHV4 AKR7A2P1-201ENST00000460134 915 ntBASIC17.4■□□□□ 0.38
NEDD1Q8NHV4 ARTN-209ENST00000479128 471 ntTSL 3 BASIC17.4■□□□□ 0.38
NEDD1Q8NHV4 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC17.4■□□□□ 0.38
NEDD1Q8NHV4 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms