Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBR1Q8IWV7 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UBR1Q8IWV7 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
UBR1Q8IWV7 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC20.67■□□□□ 0.9
UBR1Q8IWV7 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC20.67■□□□□ 0.9
UBR1Q8IWV7 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC20.67■□□□□ 0.9
UBR1Q8IWV7 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC20.67■□□□□ 0.9
UBR1Q8IWV7 BPIFB5P-201ENST00000457066 1099 ntBASIC20.67■□□□□ 0.9
UBR1Q8IWV7 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC20.67■□□□□ 0.9
UBR1Q8IWV7 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBR1Q8IWV7 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC20.67■□□□□ 0.9
UBR1Q8IWV7 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC20.67■□□□□ 0.9
UBR1Q8IWV7 AC006504.5-208ENST00000588784 2401 ntBASIC20.67■□□□□ 0.9
UBR1Q8IWV7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UBR1Q8IWV7 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBR1Q8IWV7 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UBR1Q8IWV7 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UBR1Q8IWV7 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBR1Q8IWV7 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
UBR1Q8IWV7 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC20.67■□□□□ 0.9
UBR1Q8IWV7 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UBR1Q8IWV7 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC20.67■□□□□ 0.9
UBR1Q8IWV7 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBR1Q8IWV7 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBR1Q8IWV7 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC20.67■□□□□ 0.9
UBR1Q8IWV7 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBR1Q8IWV7 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC20.67■□□□□ 0.9
UBR1Q8IWV7 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBR1Q8IWV7 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC20.67■□□□□ 0.9
UBR1Q8IWV7 AC004522.1-201ENST00000419978 654 ntBASIC20.67■□□□□ 0.9
UBR1Q8IWV7 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
UBR1Q8IWV7 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
UBR1Q8IWV7 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
UBR1Q8IWV7 APOC1-209ENST00000592885 562 ntTSL 3 BASIC20.67■□□□□ 0.9
UBR1Q8IWV7 TP53-221ENST00000615910 1149 ntTSL 5 BASIC20.67■□□□□ 0.9
UBR1Q8IWV7 RARS-210ENST00000626454 177 ntTSL 5 BASIC20.67■□□□□ 0.9
UBR1Q8IWV7 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC20.67■□□□□ 0.9
UBR1Q8IWV7 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UBR1Q8IWV7 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC20.66■□□□□ 0.9
UBR1Q8IWV7 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBR1Q8IWV7 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBR1Q8IWV7 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBR1Q8IWV7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
UBR1Q8IWV7 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
UBR1Q8IWV7 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBR1Q8IWV7 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC20.66■□□□□ 0.9
UBR1Q8IWV7 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC20.66■□□□□ 0.9
UBR1Q8IWV7 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBR1Q8IWV7 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
UBR1Q8IWV7 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBR1Q8IWV7 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC20.66■□□□□ 0.9
UBR1Q8IWV7 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBR1Q8IWV7 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
UBR1Q8IWV7 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC20.66■□□□□ 0.9
UBR1Q8IWV7 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC20.66■□□□□ 0.9
UBR1Q8IWV7 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
UBR1Q8IWV7 MBP-238ENST00000580402 915 ntTSL 5 BASIC20.66■□□□□ 0.9
UBR1Q8IWV7 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC20.66■□□□□ 0.9
UBR1Q8IWV7 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
UBR1Q8IWV7 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC20.66■□□□□ 0.9
UBR1Q8IWV7 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
UBR1Q8IWV7 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBR1Q8IWV7 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBR1Q8IWV7 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBR1Q8IWV7 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC20.65■□□□□ 0.9
UBR1Q8IWV7 HLA-DPA2-205ENST00000433582 733 ntBASIC20.65■□□□□ 0.9
UBR1Q8IWV7 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC20.65■□□□□ 0.9
UBR1Q8IWV7 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC20.65■□□□□ 0.9
UBR1Q8IWV7 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
UBR1Q8IWV7 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC20.65■□□□□ 0.9
UBR1Q8IWV7 PTPN20CP-201ENST00000614090 920 ntBASIC20.65■□□□□ 0.9
UBR1Q8IWV7 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
UBR1Q8IWV7 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBR1Q8IWV7 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
UBR1Q8IWV7 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
UBR1Q8IWV7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBR1Q8IWV7 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBR1Q8IWV7 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.65■□□□□ 0.9
UBR1Q8IWV7 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
UBR1Q8IWV7 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
UBR1Q8IWV7 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC20.64■□□□□ 0.9
UBR1Q8IWV7 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
UBR1Q8IWV7 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC20.64■□□□□ 0.9
UBR1Q8IWV7 AL451000.1-201ENST00000451300 1186 ntBASIC20.64■□□□□ 0.9
UBR1Q8IWV7 KRT18P37-201ENST00000520711 1282 ntBASIC20.64■□□□□ 0.9
UBR1Q8IWV7 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
UBR1Q8IWV7 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC20.64■□□□□ 0.9
UBR1Q8IWV7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
UBR1Q8IWV7 PHB-210ENST00000511832 1509 ntTSL 2 BASIC20.64■□□□□ 0.89
UBR1Q8IWV7 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
UBR1Q8IWV7 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
UBR1Q8IWV7 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
UBR1Q8IWV7 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC20.64■□□□□ 0.89
UBR1Q8IWV7 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
UBR1Q8IWV7 PIFO-201ENST00000369737 746 ntTSL 2 BASIC20.64■□□□□ 0.89
UBR1Q8IWV7 RPL3P2-204ENST00000413027 1203 ntBASIC20.64■□□□□ 0.89
UBR1Q8IWV7 LINC00265-2P-201ENST00000413372 782 ntBASIC20.64■□□□□ 0.89
UBR1Q8IWV7 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC20.64■□□□□ 0.89
UBR1Q8IWV7 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
UBR1Q8IWV7 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms