Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC83Q8IWF9 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC83Q8IWF9 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC83Q8IWF9 INTS4P2-202ENST00000614726 2019 ntBASIC17.75■□□□□ 0.43
CCDC83Q8IWF9 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC83Q8IWF9 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC83Q8IWF9 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC83Q8IWF9 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC83Q8IWF9 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC83Q8IWF9 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC83Q8IWF9 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC83Q8IWF9 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC83Q8IWF9 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
CCDC83Q8IWF9 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC83Q8IWF9 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC83Q8IWF9 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC83Q8IWF9 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC83Q8IWF9 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CCDC83Q8IWF9 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 AL354702.1-201ENST00000442006 1960 ntBASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 AL645937.2-201ENST00000396808 931 ntBASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 AC093813.1-201ENST00000605066 256 ntBASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC83Q8IWF9 CNTNAP3P2-201ENST00000617175 3861 ntBASIC17.73■□□□□ 0.43
CCDC83Q8IWF9 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC83Q8IWF9 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CCDC83Q8IWF9 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC83Q8IWF9 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC83Q8IWF9 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CCDC83Q8IWF9 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC83Q8IWF9 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC83Q8IWF9 AC015802.1-201ENST00000588104 1449 ntBASIC17.73■□□□□ 0.43
CCDC83Q8IWF9 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC83Q8IWF9 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC83Q8IWF9 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC83Q8IWF9 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CCDC83Q8IWF9 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC83Q8IWF9 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC83Q8IWF9 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC83Q8IWF9 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
CCDC83Q8IWF9 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC83Q8IWF9 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC83Q8IWF9 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC83Q8IWF9 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC83Q8IWF9 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC83Q8IWF9 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.73■□□□□ 0.43
CCDC83Q8IWF9 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.73■□□□□ 0.43
CCDC83Q8IWF9 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.73■□□□□ 0.43
CCDC83Q8IWF9 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.73■□□□□ 0.43
CCDC83Q8IWF9 BX539320.1-201ENST00000623759 877 ntBASIC17.73■□□□□ 0.43
CCDC83Q8IWF9 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC83Q8IWF9 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC83Q8IWF9 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC83Q8IWF9 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CCDC83Q8IWF9 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC17.73■□□□□ 0.43
CCDC83Q8IWF9 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC83Q8IWF9 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC83Q8IWF9 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC83Q8IWF9 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC83Q8IWF9 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms