Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
LYSMD2Q8IV50 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 AGGF1P1-201ENST00000509500 2073 ntBASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 VN2R19P-201ENST00000442399 1052 ntBASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 PHKG1P2-201ENST00000457537 863 ntBASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 AC117500.6-201ENST00000624871 588 ntBASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 REXO1L4P-201ENST00000605109 1937 ntBASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 AC012508.2-201ENST00000567613 1472 ntBASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LYSMD2Q8IV50 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LYSMD2Q8IV50 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LYSMD2Q8IV50 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
LYSMD2Q8IV50 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
LYSMD2Q8IV50 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LYSMD2Q8IV50 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LYSMD2Q8IV50 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
LYSMD2Q8IV50 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LYSMD2Q8IV50 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
LYSMD2Q8IV50 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LYSMD2Q8IV50 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.27□□□□□ -0.28
LYSMD2Q8IV50 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LYSMD2Q8IV50 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LYSMD2Q8IV50 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.28
LYSMD2Q8IV50 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
LYSMD2Q8IV50 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
LYSMD2Q8IV50 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LYSMD2Q8IV50 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
LYSMD2Q8IV50 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LYSMD2Q8IV50 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13.27□□□□□ -0.29
LYSMD2Q8IV50 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC13.27□□□□□ -0.29
LYSMD2Q8IV50 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC13.27□□□□□ -0.29
LYSMD2Q8IV50 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC13.27□□□□□ -0.29
LYSMD2Q8IV50 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LYSMD2Q8IV50 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.27□□□□□ -0.29
LYSMD2Q8IV50 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.27□□□□□ -0.29
LYSMD2Q8IV50 RHOQP3-201ENST00000437982 621 ntBASIC13.27□□□□□ -0.29
LYSMD2Q8IV50 AC140658.5-201ENST00000438532 169 ntBASIC13.27□□□□□ -0.29
LYSMD2Q8IV50 AC098859.1-201ENST00000502915 1238 ntBASIC13.27□□□□□ -0.29
LYSMD2Q8IV50 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC13.27□□□□□ -0.29
LYSMD2Q8IV50 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
LYSMD2Q8IV50 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC13.27□□□□□ -0.29
LYSMD2Q8IV50 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
LYSMD2Q8IV50 MIR4751-201ENST00000578027 74 ntBASIC13.27□□□□□ -0.29
LYSMD2Q8IV50 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
LYSMD2Q8IV50 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.27□□□□□ -0.29
LYSMD2Q8IV50 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.27□□□□□ -0.29
LYSMD2Q8IV50 LINC01711-201ENST00000598340 967 ntBASIC13.27□□□□□ -0.29
LYSMD2Q8IV50 AC097359.3-201ENST00000603982 1210 ntBASIC13.27□□□□□ -0.29
LYSMD2Q8IV50 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LYSMD2Q8IV50 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LYSMD2Q8IV50 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms