Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.51□□□□□ -0.25
LRRC28Q86X40 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.51□□□□□ -0.25
LRRC28Q86X40 TEX28P1-201ENST00000613479 1221 ntBASIC13.51□□□□□ -0.25
LRRC28Q86X40 TEX28P2-201ENST00000617764 1221 ntBASIC13.51□□□□□ -0.25
LRRC28Q86X40 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.51□□□□□ -0.25
LRRC28Q86X40 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRC28Q86X40 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.51□□□□□ -0.25
LRRC28Q86X40 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.51□□□□□ -0.25
LRRC28Q86X40 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
LRRC28Q86X40 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRC28Q86X40 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LRRC28Q86X40 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
LRRC28Q86X40 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
LRRC28Q86X40 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
LRRC28Q86X40 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRC28Q86X40 AC018442.1-201ENST00000421439 2061 ntBASIC13.51□□□□□ -0.25
LRRC28Q86X40 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.51□□□□□ -0.25
LRRC28Q86X40 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.51□□□□□ -0.25
LRRC28Q86X40 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRRC28Q86X40 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.5□□□□□ -0.25
LRRC28Q86X40 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRC28Q86X40 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRC28Q86X40 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRC28Q86X40 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRC28Q86X40 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
LRRC28Q86X40 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
LRRC28Q86X40 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
LRRC28Q86X40 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.5□□□□□ -0.25
LRRC28Q86X40 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRC28Q86X40 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
LRRC28Q86X40 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LRRC28Q86X40 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRC28Q86X40 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
LRRC28Q86X40 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
LRRC28Q86X40 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRC28Q86X40 KRT8P12-202ENST00000472924 1397 ntBASIC13.5□□□□□ -0.25
LRRC28Q86X40 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRC28Q86X40 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.5□□□□□ -0.25
LRRC28Q86X40 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRC28Q86X40 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRC28Q86X40 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
LRRC28Q86X40 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRC28Q86X40 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.5□□□□□ -0.25
LRRC28Q86X40 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.5□□□□□ -0.25
LRRC28Q86X40 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.5□□□□□ -0.25
LRRC28Q86X40 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRC28Q86X40 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LRRC28Q86X40 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.5□□□□□ -0.25
LRRC28Q86X40 TSSK5P-201ENST00000423978 907 ntBASIC13.5□□□□□ -0.25
LRRC28Q86X40 GHSR-202ENST00000427970 912 ntBASIC13.5□□□□□ -0.25
LRRC28Q86X40 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.5□□□□□ -0.25
LRRC28Q86X40 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.5□□□□□ -0.25
LRRC28Q86X40 AC004890.2-204ENST00000481968 304 ntBASIC13.5□□□□□ -0.25
LRRC28Q86X40 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.5□□□□□ -0.25
LRRC28Q86X40 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
LRRC28Q86X40 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.5□□□□□ -0.25
LRRC28Q86X40 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.5□□□□□ -0.25
LRRC28Q86X40 MIR3197-201ENST00000582241 73 ntBASIC13.5□□□□□ -0.25
LRRC28Q86X40 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
LRRC28Q86X40 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.5□□□□□ -0.25
LRRC28Q86X40 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LRRC28Q86X40 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRC28Q86X40 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRC28Q86X40 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.5□□□□□ -0.25
LRRC28Q86X40 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
LRRC28Q86X40 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.5□□□□□ -0.25
LRRC28Q86X40 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
LRRC28Q86X40 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.5□□□□□ -0.25
LRRC28Q86X40 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRRC28Q86X40 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
LRRC28Q86X40 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.5□□□□□ -0.25
LRRC28Q86X40 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.5□□□□□ -0.25
LRRC28Q86X40 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.5□□□□□ -0.25
LRRC28Q86X40 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRC28Q86X40 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
LRRC28Q86X40 AP000845.1-201ENST00000581677 2131 ntBASIC13.49□□□□□ -0.25
LRRC28Q86X40 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
LRRC28Q86X40 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LRRC28Q86X40 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
LRRC28Q86X40 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
LRRC28Q86X40 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.49□□□□□ -0.25
LRRC28Q86X40 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRC28Q86X40 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRC28Q86X40 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
LRRC28Q86X40 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
LRRC28Q86X40 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRC28Q86X40 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.49□□□□□ -0.25
LRRC28Q86X40 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
LRRC28Q86X40 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRC28Q86X40 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRC28Q86X40 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRC28Q86X40 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRC28Q86X40 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
LRRC28Q86X40 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
LRRC28Q86X40 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRC28Q86X40 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
LRRC28Q86X40 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LRRC28Q86X40 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.49□□□□□ -0.25
LRRC28Q86X40 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRRC28Q86X40 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms