Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
CCDC25Q86WR0 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC25Q86WR0 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CCDC25Q86WR0 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC25Q86WR0 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC25Q86WR0 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC25Q86WR0 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CCDC25Q86WR0 AC092135.3-201ENST00000624151 1846 ntBASIC15.66■□□□□ 0.1
CCDC25Q86WR0 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC25Q86WR0 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC25Q86WR0 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC25Q86WR0 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC25Q86WR0 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC25Q86WR0 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC25Q86WR0 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC25Q86WR0 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC25Q86WR0 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC25Q86WR0 LILRP1-201ENST00000444199 1370 ntBASIC15.66■□□□□ 0.1
CCDC25Q86WR0 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC25Q86WR0 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC25Q86WR0 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
CCDC25Q86WR0 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC25Q86WR0 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC25Q86WR0 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC25Q86WR0 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC25Q86WR0 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.66■□□□□ 0.1
CCDC25Q86WR0 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
CCDC25Q86WR0 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC25Q86WR0 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
CCDC25Q86WR0 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.66■□□□□ 0.1
CCDC25Q86WR0 AC007967.4-201ENST00000614700 386 ntBASIC15.66■□□□□ 0.1
CCDC25Q86WR0 MIR6069-201ENST00000620069 79 ntBASIC15.66■□□□□ 0.1
CCDC25Q86WR0 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CCDC25Q86WR0 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC25Q86WR0 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CCDC25Q86WR0 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC25Q86WR0 AC015802.1-201ENST00000588104 1449 ntBASIC15.66■□□□□ 0.1
CCDC25Q86WR0 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC25Q86WR0 BEND3P1-201ENST00000421591 1944 ntBASIC15.66■□□□□ 0.1
CCDC25Q86WR0 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CCDC25Q86WR0 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC25Q86WR0 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC25Q86WR0 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC25Q86WR0 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC25Q86WR0 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC25Q86WR0 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC25Q86WR0 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC25Q86WR0 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC25Q86WR0 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC25Q86WR0 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
CCDC25Q86WR0 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC25Q86WR0 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC25Q86WR0 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC25Q86WR0 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC25Q86WR0 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC25Q86WR0 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CCDC25Q86WR0 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC15.65■□□□□ 0.1
CCDC25Q86WR0 AL035456.1-201ENST00000456064 1369 ntBASIC15.65■□□□□ 0.1
CCDC25Q86WR0 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC25Q86WR0 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC25Q86WR0 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC25Q86WR0 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC25Q86WR0 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC25Q86WR0 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC25Q86WR0 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC25Q86WR0 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CCDC25Q86WR0 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC25Q86WR0 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CCDC25Q86WR0 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.65■□□□□ 0.1
CCDC25Q86WR0 AL079307.3-201ENST00000556114 283 ntBASIC15.65■□□□□ 0.1
CCDC25Q86WR0 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CCDC25Q86WR0 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC25Q86WR0 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.65■□□□□ 0.1
CCDC25Q86WR0 LINC00628-201ENST00000628516 1289 ntBASIC15.65■□□□□ 0.1
CCDC25Q86WR0 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC25Q86WR0 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC25Q86WR0 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC25Q86WR0 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CCDC25Q86WR0 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC25Q86WR0 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC25Q86WR0 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC25Q86WR0 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC25Q86WR0 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC25Q86WR0 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC25Q86WR0 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC25Q86WR0 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC25Q86WR0 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CCDC25Q86WR0 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC25Q86WR0 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC25Q86WR0 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC25Q86WR0 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
CCDC25Q86WR0 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC25Q86WR0 ELL2P1-201ENST00000413990 1906 ntBASIC15.64■□□□□ 0.09
CCDC25Q86WR0 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 148.8 ms