Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PACS2Q86VP3 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
PACS2Q86VP3 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PACS2Q86VP3 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PACS2Q86VP3 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
PACS2Q86VP3 RTN1-203ENST00000395090 1609 ntTSL 2 BASIC15.33■□□□□ 0.04
PACS2Q86VP3 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PACS2Q86VP3 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PACS2Q86VP3 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
PACS2Q86VP3 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
PACS2Q86VP3 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.33■□□□□ 0.04
PACS2Q86VP3 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PACS2Q86VP3 OLA1-206ENST00000428402 1270 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PACS2Q86VP3 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.33■□□□□ 0.04
PACS2Q86VP3 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.33■□□□□ 0.04
PACS2Q86VP3 CEND1P1-201ENST00000451006 455 ntBASIC15.33■□□□□ 0.04
PACS2Q86VP3 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.33■□□□□ 0.04
PACS2Q86VP3 AC117500.1-201ENST00000497352 755 ntBASIC15.33■□□□□ 0.04
PACS2Q86VP3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
PACS2Q86VP3 AL079304.1-201ENST00000554595 828 ntTSL 2 BASIC15.33■□□□□ 0.04
PACS2Q86VP3 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.33■□□□□ 0.04
PACS2Q86VP3 AL132657.2-201ENST00000564417 358 ntBASIC15.33■□□□□ 0.04
PACS2Q86VP3 AL365223.1-201ENST00000574864 1297 ntBASIC15.33■□□□□ 0.04
PACS2Q86VP3 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.33■□□□□ 0.04
PACS2Q86VP3 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.33■□□□□ 0.04
PACS2Q86VP3 AL356094.1-201ENST00000624663 1212 ntBASIC15.33■□□□□ 0.04
PACS2Q86VP3 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PACS2Q86VP3 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
PACS2Q86VP3 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PACS2Q86VP3 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PACS2Q86VP3 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PACS2Q86VP3 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.33■□□□□ 0.04
PACS2Q86VP3 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PACS2Q86VP3 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.33■□□□□ 0.04
PACS2Q86VP3 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC15.33■□□□□ 0.04
PACS2Q86VP3 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PACS2Q86VP3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.33■□□□□ 0.04
PACS2Q86VP3 FAM90A12P-201ENST00000519497 2375 ntBASIC15.33■□□□□ 0.04
PACS2Q86VP3 FAM90A24P-201ENST00000520792 2369 ntBASIC15.33■□□□□ 0.04
PACS2Q86VP3 ELL2P1-201ENST00000413990 1906 ntBASIC15.33■□□□□ 0.04
PACS2Q86VP3 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PACS2Q86VP3 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PACS2Q86VP3 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC15.32■□□□□ 0.04
PACS2Q86VP3 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
PACS2Q86VP3 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PACS2Q86VP3 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PACS2Q86VP3 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PACS2Q86VP3 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PACS2Q86VP3 BX324167.2-201ENST00000623717 3316 ntBASIC15.32■□□□□ 0.04
PACS2Q86VP3 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC15.32■□□□□ 0.04
PACS2Q86VP3 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PACS2Q86VP3 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PACS2Q86VP3 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PACS2Q86VP3 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PACS2Q86VP3 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
PACS2Q86VP3 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PACS2Q86VP3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PACS2Q86VP3 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
PACS2Q86VP3 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PACS2Q86VP3 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PACS2Q86VP3 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.32■□□□□ 0.04
PACS2Q86VP3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.32■□□□□ 0.04
PACS2Q86VP3 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PACS2Q86VP3 RN7SKP199-201ENST00000410325 305 ntBASIC15.32■□□□□ 0.04
PACS2Q86VP3 ALG1L5P-201ENST00000482043 771 ntBASIC15.32■□□□□ 0.04
PACS2Q86VP3 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.32■□□□□ 0.04
PACS2Q86VP3 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
PACS2Q86VP3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.32■□□□□ 0.04
PACS2Q86VP3 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.32■□□□□ 0.04
PACS2Q86VP3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.32■□□□□ 0.04
PACS2Q86VP3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PACS2Q86VP3 MIR4469-201ENST00000583919 79 ntBASIC15.32■□□□□ 0.04
PACS2Q86VP3 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC15.32■□□□□ 0.04
PACS2Q86VP3 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.32■□□□□ 0.04
PACS2Q86VP3 CYP2A7P1-201ENST00000595391 815 ntBASIC15.32■□□□□ 0.04
PACS2Q86VP3 AC135178.5-201ENST00000602597 674 ntBASIC15.32■□□□□ 0.04
PACS2Q86VP3 AC144521.1-201ENST00000607148 956 ntBASIC15.32■□□□□ 0.04
PACS2Q86VP3 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.32■□□□□ 0.04
PACS2Q86VP3 AL691403.2-201ENST00000618460 490 ntBASIC15.32■□□□□ 0.04
PACS2Q86VP3 AL161645.1-201ENST00000622716 1255 ntBASIC15.32■□□□□ 0.04
PACS2Q86VP3 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PACS2Q86VP3 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PACS2Q86VP3 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PACS2Q86VP3 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PACS2Q86VP3 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PACS2Q86VP3 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PACS2Q86VP3 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.32■□□□□ 0.04
PACS2Q86VP3 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PACS2Q86VP3 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PACS2Q86VP3 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PACS2Q86VP3 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PACS2Q86VP3 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PACS2Q86VP3 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PACS2Q86VP3 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PACS2Q86VP3 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.32■□□□□ 0.04
PACS2Q86VP3 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.32■□□□□ 0.04
PACS2Q86VP3 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.31■□□□□ 0.04
PACS2Q86VP3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.31■□□□□ 0.04
PACS2Q86VP3 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PACS2Q86VP3 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms