Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
ZNF546Q86UE3 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF546Q86UE3 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF546Q86UE3 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
ZNF546Q86UE3 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF546Q86UE3 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.6□□□□□ -0.39
ZNF546Q86UE3 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.6□□□□□ -0.39
ZNF546Q86UE3 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.6□□□□□ -0.39
ZNF546Q86UE3 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF546Q86UE3 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC12.6□□□□□ -0.39
ZNF546Q86UE3 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF546Q86UE3 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF546Q86UE3 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF546Q86UE3 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF546Q86UE3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
ZNF546Q86UE3 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC12.6□□□□□ -0.39
ZNF546Q86UE3 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
ZNF546Q86UE3 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF546Q86UE3 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
ZNF546Q86UE3 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
ZNF546Q86UE3 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
ZNF546Q86UE3 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF546Q86UE3 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF546Q86UE3 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
ZNF546Q86UE3 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF546Q86UE3 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF546Q86UE3 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
ZNF546Q86UE3 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
ZNF546Q86UE3 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF546Q86UE3 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF546Q86UE3 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
ZNF546Q86UE3 FAM210CP-201ENST00000445714 574 ntBASIC12.6□□□□□ -0.39
ZNF546Q86UE3 AC109635.5-201ENST00000533593 962 ntBASIC12.6□□□□□ -0.39
ZNF546Q86UE3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF546Q86UE3 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF546Q86UE3 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.6□□□□□ -0.39
ZNF546Q86UE3 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF546Q86UE3 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF546Q86UE3 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
ZNF546Q86UE3 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
ZNF546Q86UE3 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF546Q86UE3 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.6□□□□□ -0.39
ZNF546Q86UE3 STRCP1-201ENST00000509801 5328 ntBASIC12.6□□□□□ -0.39
ZNF546Q86UE3 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.6□□□□□ -0.39
ZNF546Q86UE3 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.6□□□□□ -0.39
ZNF546Q86UE3 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF546Q86UE3 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ZNF546Q86UE3 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 AL023775.1-201ENST00000454907 1746 ntBASIC12.59□□□□□ -0.39
ZNF546Q86UE3 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 AKR1C7P-201ENST00000305623 895 ntBASIC12.59□□□□□ -0.39
ZNF546Q86UE3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 OR7E47P-204ENST00000575924 449 ntBASIC12.59□□□□□ -0.39
ZNF546Q86UE3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC12.59□□□□□ -0.39
ZNF546Q86UE3 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms