Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHFQ7M4L6 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHFQ7M4L6 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
SHFQ7M4L6 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SHFQ7M4L6 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHFQ7M4L6 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.71□□□□□ -0.21
SHFQ7M4L6 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHFQ7M4L6 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHFQ7M4L6 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHFQ7M4L6 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHFQ7M4L6 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHFQ7M4L6 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHFQ7M4L6 RPSAP43-201ENST00000402237 625 ntBASIC13.71□□□□□ -0.21
SHFQ7M4L6 AC254562.1-201ENST00000417586 456 ntBASIC13.71□□□□□ -0.21
SHFQ7M4L6 BX842568.4-201ENST00000421222 227 ntBASIC13.71□□□□□ -0.21
SHFQ7M4L6 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.71□□□□□ -0.21
SHFQ7M4L6 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SHFQ7M4L6 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.71□□□□□ -0.21
SHFQ7M4L6 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHFQ7M4L6 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
SHFQ7M4L6 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.71□□□□□ -0.21
SHFQ7M4L6 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.71□□□□□ -0.21
SHFQ7M4L6 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SHFQ7M4L6 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHFQ7M4L6 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.71□□□□□ -0.21
SHFQ7M4L6 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.71□□□□□ -0.21
SHFQ7M4L6 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.71□□□□□ -0.21
SHFQ7M4L6 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.71□□□□□ -0.21
SHFQ7M4L6 AC025048.3-201ENST00000590609 569 ntBASIC13.71□□□□□ -0.21
SHFQ7M4L6 AC010327.4-202ENST00000591484 748 ntBASIC13.71□□□□□ -0.21
SHFQ7M4L6 AC005702.4-201ENST00000618393 416 ntBASIC13.71□□□□□ -0.21
SHFQ7M4L6 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.71□□□□□ -0.21
SHFQ7M4L6 AF228730.6-201ENST00000641497 218 ntBASIC13.71□□□□□ -0.21
SHFQ7M4L6 AC084121.3-201ENST00000641716 218 ntBASIC13.71□□□□□ -0.21
SHFQ7M4L6 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SHFQ7M4L6 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SHFQ7M4L6 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.71□□□□□ -0.21
SHFQ7M4L6 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHFQ7M4L6 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHFQ7M4L6 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHFQ7M4L6 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
SHFQ7M4L6 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHFQ7M4L6 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHFQ7M4L6 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SHFQ7M4L6 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
SHFQ7M4L6 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.71□□□□□ -0.22
SHFQ7M4L6 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
SHFQ7M4L6 AC015802.1-201ENST00000588104 1449 ntBASIC13.71□□□□□ -0.22
SHFQ7M4L6 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
SHFQ7M4L6 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.22
SHFQ7M4L6 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
SHFQ7M4L6 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.71□□□□□ -0.22
SHFQ7M4L6 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SHFQ7M4L6 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.71□□□□□ -0.22
SHFQ7M4L6 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
SHFQ7M4L6 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.71□□□□□ -0.22
SHFQ7M4L6 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.71□□□□□ -0.22
SHFQ7M4L6 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
SHFQ7M4L6 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SHFQ7M4L6 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
SHFQ7M4L6 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
SHFQ7M4L6 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SHFQ7M4L6 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.71□□□□□ -0.22
SHFQ7M4L6 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SHFQ7M4L6 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHFQ7M4L6 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.7□□□□□ -0.22
SHFQ7M4L6 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHFQ7M4L6 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHFQ7M4L6 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHFQ7M4L6 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.7□□□□□ -0.22
SHFQ7M4L6 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SHFQ7M4L6 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHFQ7M4L6 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SHFQ7M4L6 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHFQ7M4L6 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SHFQ7M4L6 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHFQ7M4L6 AL080243.2-201ENST00000418783 582 ntBASIC13.7□□□□□ -0.22
SHFQ7M4L6 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.7□□□□□ -0.22
SHFQ7M4L6 AC015922.1-201ENST00000421102 1152 ntBASIC13.7□□□□□ -0.22
SHFQ7M4L6 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.7□□□□□ -0.22
SHFQ7M4L6 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SHFQ7M4L6 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.7□□□□□ -0.22
SHFQ7M4L6 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SHFQ7M4L6 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SHFQ7M4L6 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHFQ7M4L6 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.7□□□□□ -0.22
SHFQ7M4L6 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SHFQ7M4L6 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHFQ7M4L6 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.7□□□□□ -0.22
SHFQ7M4L6 LINC00628-201ENST00000628516 1289 ntBASIC13.7□□□□□ -0.22
SHFQ7M4L6 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SHFQ7M4L6 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHFQ7M4L6 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
SHFQ7M4L6 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SHFQ7M4L6 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHFQ7M4L6 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.7□□□□□ -0.22
SHFQ7M4L6 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.7□□□□□ -0.22
SHFQ7M4L6 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHFQ7M4L6 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SHFQ7M4L6 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms