Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 AC087481.3-201ENST00000602886 1894 ntBASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 AC020907.1-201ENST00000616460 1350 ntBASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 C8orf49-201ENST00000525043 1968 ntBASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 AL591846.1-201ENST00000451736 433 ntBASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 RPSAP36-202ENST00000494591 1261 ntBASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 FTLP10-202ENST00000505798 471 ntBASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 COX5BP1-201ENST00000507622 393 ntBASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 AC106820.3-201ENST00000561653 397 ntBASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 MIR4741-201ENST00000579822 90 ntBASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 AC138466.3-201ENST00000619983 221 ntBASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 AC006058.4-201ENST00000624016 1670 ntBASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
H3F3CQ6NXT2 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
H3F3CQ6NXT2 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
H3F3CQ6NXT2 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
H3F3CQ6NXT2 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
H3F3CQ6NXT2 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
H3F3CQ6NXT2 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
H3F3CQ6NXT2 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
H3F3CQ6NXT2 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.96□□□□□ -0.17
H3F3CQ6NXT2 AL161772.1-201ENST00000610494 4412 ntBASIC13.96□□□□□ -0.17
H3F3CQ6NXT2 AC138035.3-201ENST00000622706 2791 ntBASIC13.96□□□□□ -0.17
H3F3CQ6NXT2 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
H3F3CQ6NXT2 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
H3F3CQ6NXT2 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
H3F3CQ6NXT2 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
H3F3CQ6NXT2 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.96□□□□□ -0.17
H3F3CQ6NXT2 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.96□□□□□ -0.17
H3F3CQ6NXT2 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
H3F3CQ6NXT2 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
H3F3CQ6NXT2 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
H3F3CQ6NXT2 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
H3F3CQ6NXT2 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
H3F3CQ6NXT2 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
H3F3CQ6NXT2 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
H3F3CQ6NXT2 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
H3F3CQ6NXT2 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.96□□□□□ -0.17
H3F3CQ6NXT2 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
H3F3CQ6NXT2 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.96□□□□□ -0.17
H3F3CQ6NXT2 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.96□□□□□ -0.17
H3F3CQ6NXT2 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.96□□□□□ -0.17
H3F3CQ6NXT2 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.96□□□□□ -0.17
H3F3CQ6NXT2 AP003171.2-201ENST00000528208 925 ntBASIC13.96□□□□□ -0.17
H3F3CQ6NXT2 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.96□□□□□ -0.17
H3F3CQ6NXT2 ZACNP1-201ENST00000612259 710 ntBASIC13.96□□□□□ -0.17
H3F3CQ6NXT2 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.96□□□□□ -0.17
H3F3CQ6NXT2 MIR6787-201ENST00000616675 61 ntBASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms