Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.76■□□□□ 0.11
TTC39BQ5VTQ0 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TTC39BQ5VTQ0 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TTC39BQ5VTQ0 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.75■□□□□ 0.11
TTC39BQ5VTQ0 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.75■□□□□ 0.11
TTC39BQ5VTQ0 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TTC39BQ5VTQ0 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TTC39BQ5VTQ0 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TTC39BQ5VTQ0 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TTC39BQ5VTQ0 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TTC39BQ5VTQ0 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.75■□□□□ 0.11
TTC39BQ5VTQ0 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.75■□□□□ 0.11
TTC39BQ5VTQ0 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TTC39BQ5VTQ0 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TTC39BQ5VTQ0 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TTC39BQ5VTQ0 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TTC39BQ5VTQ0 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.75■□□□□ 0.11
TTC39BQ5VTQ0 AC112492.5-201ENST00000421897 457 ntBASIC15.75■□□□□ 0.11
TTC39BQ5VTQ0 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.75■□□□□ 0.11
TTC39BQ5VTQ0 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TTC39BQ5VTQ0 BCRP2-202ENST00000447763 634 ntBASIC15.75■□□□□ 0.11
TTC39BQ5VTQ0 BCRP6-201ENST00000510112 632 ntBASIC15.75■□□□□ 0.11
TTC39BQ5VTQ0 BCRP7-201ENST00000511549 544 ntBASIC15.75■□□□□ 0.11
TTC39BQ5VTQ0 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TTC39BQ5VTQ0 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TTC39BQ5VTQ0 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TTC39BQ5VTQ0 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.75■□□□□ 0.11
TTC39BQ5VTQ0 AC012508.2-201ENST00000567613 1472 ntBASIC15.75■□□□□ 0.11
TTC39BQ5VTQ0 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.75■□□□□ 0.11
TTC39BQ5VTQ0 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TTC39BQ5VTQ0 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TTC39BQ5VTQ0 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TTC39BQ5VTQ0 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.75■□□□□ 0.11
TTC39BQ5VTQ0 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
TTC39BQ5VTQ0 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
TTC39BQ5VTQ0 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.75■□□□□ 0.11
TTC39BQ5VTQ0 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
TTC39BQ5VTQ0 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TTC39BQ5VTQ0 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TTC39BQ5VTQ0 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
TTC39BQ5VTQ0 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TTC39BQ5VTQ0 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 MSTO2P-201ENST00000314835 1709 ntBASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 AC092933.1-201ENST00000393644 945 ntBASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 ARSEP1-201ENST00000420443 635 ntBASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 C2orf27AP3-201ENST00000434123 579 ntBASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 AC017083.2-201ENST00000608069 979 ntBASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 AL354718.3-201ENST00000616414 581 ntBASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 CR382287.1-201ENST00000623954 586 ntBASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TTC39BQ5VTQ0 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.73■□□□□ 0.11
TTC39BQ5VTQ0 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
TTC39BQ5VTQ0 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TTC39BQ5VTQ0 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.73■□□□□ 0.11
TTC39BQ5VTQ0 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TTC39BQ5VTQ0 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TTC39BQ5VTQ0 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TTC39BQ5VTQ0 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TTC39BQ5VTQ0 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TTC39BQ5VTQ0 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.73■□□□□ 0.11
TTC39BQ5VTQ0 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TTC39BQ5VTQ0 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TTC39BQ5VTQ0 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TTC39BQ5VTQ0 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms