Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 TPM3P8-201ENST00000330554 643 ntBASIC14□□□□□ -0.17
PRICKLE4Q2TBC4 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14□□□□□ -0.17
PRICKLE4Q2TBC4 RN7SKP230-201ENST00000365642 335 ntBASIC14□□□□□ -0.17
PRICKLE4Q2TBC4 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14□□□□□ -0.17
PRICKLE4Q2TBC4 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
PRICKLE4Q2TBC4 CNN2P8-201ENST00000421872 913 ntBASIC14□□□□□ -0.17
PRICKLE4Q2TBC4 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14□□□□□ -0.17
PRICKLE4Q2TBC4 AC005034.1-201ENST00000426657 489 ntBASIC14□□□□□ -0.17
PRICKLE4Q2TBC4 KRT43P-201ENST00000434019 910 ntBASIC14□□□□□ -0.17
PRICKLE4Q2TBC4 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
PRICKLE4Q2TBC4 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14□□□□□ -0.17
PRICKLE4Q2TBC4 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
PRICKLE4Q2TBC4 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14□□□□□ -0.17
PRICKLE4Q2TBC4 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14□□□□□ -0.17
PRICKLE4Q2TBC4 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14□□□□□ -0.17
PRICKLE4Q2TBC4 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14□□□□□ -0.17
PRICKLE4Q2TBC4 APRT-204ENST00000563655 709 ntTSL 5 BASIC14□□□□□ -0.17
PRICKLE4Q2TBC4 AC106886.1-201ENST00000568660 600 ntBASIC14□□□□□ -0.17
PRICKLE4Q2TBC4 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14□□□□□ -0.17
PRICKLE4Q2TBC4 ECM1P1-201ENST00000604092 1279 ntBASIC14□□□□□ -0.17
PRICKLE4Q2TBC4 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14□□□□□ -0.17
PRICKLE4Q2TBC4 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14□□□□□ -0.17
PRICKLE4Q2TBC4 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
PRICKLE4Q2TBC4 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PRICKLE4Q2TBC4 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PRICKLE4Q2TBC4 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14□□□□□ -0.17
PRICKLE4Q2TBC4 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14□□□□□ -0.17
PRICKLE4Q2TBC4 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PRICKLE4Q2TBC4 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14□□□□□ -0.17
PRICKLE4Q2TBC4 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PRICKLE4Q2TBC4 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PRICKLE4Q2TBC4 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
PRICKLE4Q2TBC4 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
PRICKLE4Q2TBC4 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PRICKLE4Q2TBC4 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PRICKLE4Q2TBC4 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14□□□□□ -0.17
PRICKLE4Q2TBC4 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14□□□□□ -0.17
PRICKLE4Q2TBC4 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PRICKLE4Q2TBC4 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 AC140479.7-201ENST00000636301 2332 ntBASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 FAM197Y7-201ENST00000432892 766 ntBASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 AL590640.2-201ENST00000457038 527 ntBASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 FTLP10-202ENST00000505798 471 ntBASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 KRT90P-201ENST00000549264 1064 ntBASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 AC138696.2-201ENST00000607376 223 ntBASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 AL035252.4-201ENST00000624174 288 ntBASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PRICKLE4Q2TBC4 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 AC007686.3-201ENST00000619017 3487 ntBASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 AC063926.2-201ENST00000623766 1308 ntBASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
PRICKLE4Q2TBC4 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms