Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC96Q2M329 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC96Q2M329 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.58■□□□□ 0.41
CCDC96Q2M329 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.58■□□□□ 0.41
CCDC96Q2M329 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.58■□□□□ 0.41
CCDC96Q2M329 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC96Q2M329 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
CCDC96Q2M329 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.58■□□□□ 0.41
CCDC96Q2M329 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC96Q2M329 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC96Q2M329 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC96Q2M329 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC96Q2M329 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
CCDC96Q2M329 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CCDC96Q2M329 MIR326-201ENST00000362220 95 ntBASIC17.58■□□□□ 0.4
CCDC96Q2M329 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC96Q2M329 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.58■□□□□ 0.4
CCDC96Q2M329 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC96Q2M329 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC96Q2M329 CNN2P10-201ENST00000443067 918 ntBASIC17.58■□□□□ 0.4
CCDC96Q2M329 HOMER2P2-201ENST00000451621 847 ntBASIC17.58■□□□□ 0.4
CCDC96Q2M329 Z93015.1-201ENST00000451718 390 ntBASIC17.58■□□□□ 0.4
CCDC96Q2M329 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC96Q2M329 FAM86HP-204ENST00000513466 959 ntBASIC17.58■□□□□ 0.4
CCDC96Q2M329 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.58■□□□□ 0.4
CCDC96Q2M329 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.58■□□□□ 0.4
CCDC96Q2M329 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
CCDC96Q2M329 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC96Q2M329 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.58■□□□□ 0.4
CCDC96Q2M329 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.58■□□□□ 0.4
CCDC96Q2M329 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC96Q2M329 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC96Q2M329 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC96Q2M329 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC96Q2M329 AC138035.3-201ENST00000622706 2791 ntBASIC17.58■□□□□ 0.4
CCDC96Q2M329 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CCDC96Q2M329 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC96Q2M329 AC007326.2-201ENST00000624224 7579 ntBASIC17.58■□□□□ 0.4
CCDC96Q2M329 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC96Q2M329 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC96Q2M329 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC96Q2M329 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC96Q2M329 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC96Q2M329 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC96Q2M329 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC96Q2M329 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC96Q2M329 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC96Q2M329 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC96Q2M329 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC96Q2M329 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC96Q2M329 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC96Q2M329 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC96Q2M329 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CCDC96Q2M329 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CCDC96Q2M329 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC96Q2M329 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC96Q2M329 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC96Q2M329 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC96Q2M329 LILRP1-201ENST00000444199 1370 ntBASIC17.57■□□□□ 0.4
CCDC96Q2M329 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CCDC96Q2M329 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC96Q2M329 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC96Q2M329 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC96Q2M329 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC96Q2M329 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC96Q2M329 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC96Q2M329 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC96Q2M329 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC96Q2M329 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CCDC96Q2M329 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.57■□□□□ 0.4
CCDC96Q2M329 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC96Q2M329 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC96Q2M329 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC96Q2M329 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
CCDC96Q2M329 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC96Q2M329 MIR4525-201ENST00000580000 75 ntBASIC17.57■□□□□ 0.4
CCDC96Q2M329 AC091271.1-201ENST00000611877 1162 ntBASIC17.57■□□□□ 0.4
CCDC96Q2M329 AC138466.3-201ENST00000619983 221 ntBASIC17.57■□□□□ 0.4
CCDC96Q2M329 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CCDC96Q2M329 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC96Q2M329 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC96Q2M329 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC96Q2M329 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC96Q2M329 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC96Q2M329 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC96Q2M329 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC96Q2M329 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC96Q2M329 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC96Q2M329 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC96Q2M329 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CCDC96Q2M329 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC96Q2M329 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CCDC96Q2M329 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CCDC96Q2M329 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC96Q2M329 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC96Q2M329 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC96Q2M329 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CCDC96Q2M329 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC96Q2M329 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC96Q2M329 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms