Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 SALL4P5-201ENST00000419001 1760 ntBASIC14.78□□□□□ -0.04
CDK3Q00526 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
CDK3Q00526 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.78□□□□□ -0.04
CDK3Q00526 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDK3Q00526 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDK3Q00526 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDK3Q00526 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CDK3Q00526 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.78□□□□□ -0.04
CDK3Q00526 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDK3Q00526 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CDK3Q00526 AC011270.2-201ENST00000624293 2550 ntBASIC14.78□□□□□ -0.04
CDK3Q00526 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.78□□□□□ -0.04
CDK3Q00526 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDK3Q00526 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDK3Q00526 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.78□□□□□ -0.04
CDK3Q00526 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDK3Q00526 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDK3Q00526 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDK3Q00526 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CDK3Q00526 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.78□□□□□ -0.04
CDK3Q00526 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.78□□□□□ -0.04
CDK3Q00526 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.78□□□□□ -0.04
CDK3Q00526 AL358472.3-201ENST00000608147 415 ntBASIC14.78□□□□□ -0.04
CDK3Q00526 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDK3Q00526 AL096828.3-201ENST00000615354 462 ntBASIC14.78□□□□□ -0.04
CDK3Q00526 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDK3Q00526 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.78□□□□□ -0.04
CDK3Q00526 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.78□□□□□ -0.04
CDK3Q00526 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDK3Q00526 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CDK3Q00526 AC104640.1-201ENST00000562617 2109 ntBASIC14.78□□□□□ -0.04
CDK3Q00526 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDK3Q00526 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDK3Q00526 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDK3Q00526 AC067930.6-201ENST00000623257 4947 ntBASIC14.78□□□□□ -0.04
CDK3Q00526 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDK3Q00526 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDK3Q00526 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDK3Q00526 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CDK3Q00526 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CDK3Q00526 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDK3Q00526 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.78□□□□□ -0.04
CDK3Q00526 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDK3Q00526 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.78□□□□□ -0.04
CDK3Q00526 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CDK3Q00526 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
CDK3Q00526 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDK3Q00526 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDK3Q00526 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CDK3Q00526 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CDK3Q00526 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CDK3Q00526 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.77□□□□□ -0.04
CDK3Q00526 NORAD-201ENST00000565493 5339 ntBASIC14.77□□□□□ -0.04
CDK3Q00526 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.77□□□□□ -0.04
CDK3Q00526 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDK3Q00526 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDK3Q00526 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
CDK3Q00526 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDK3Q00526 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDK3Q00526 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDK3Q00526 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDK3Q00526 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
CDK3Q00526 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDK3Q00526 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.77□□□□□ -0.05
CDK3Q00526 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.77□□□□□ -0.05
CDK3Q00526 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.77□□□□□ -0.05
CDK3Q00526 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDK3Q00526 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.77□□□□□ -0.05
CDK3Q00526 AC100850.1-201ENST00000506768 649 ntBASIC14.77□□□□□ -0.05
CDK3Q00526 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDK3Q00526 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.77□□□□□ -0.05
CDK3Q00526 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDK3Q00526 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.77□□□□□ -0.05
CDK3Q00526 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.77□□□□□ -0.05
CDK3Q00526 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CDK3Q00526 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDK3Q00526 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
CDK3Q00526 TCAF2P1-201ENST00000291129 2421 ntBASIC14.77□□□□□ -0.05
CDK3Q00526 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDK3Q00526 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDK3Q00526 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDK3Q00526 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.77□□□□□ -0.05
CDK3Q00526 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDK3Q00526 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDK3Q00526 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.77□□□□□ -0.05
CDK3Q00526 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDK3Q00526 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDK3Q00526 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.76□□□□□ -0.05
CDK3Q00526 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.76□□□□□ -0.05
CDK3Q00526 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDK3Q00526 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CDK3Q00526 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDK3Q00526 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.76□□□□□ -0.05
CDK3Q00526 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.76□□□□□ -0.05
CDK3Q00526 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDK3Q00526 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDK3Q00526 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDK3Q00526 MIR663B-201ENST00000408361 115 ntBASIC14.76□□□□□ -0.05
CDK3Q00526 AC104306.2-201ENST00000451877 341 ntBASIC14.76□□□□□ -0.05
CDK3Q00526 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms