Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-1P78426 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-1P78426 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-1P78426 DRD5P1-201ENST00000456605 1438 ntBASIC13.39□□□□□ -0.27
NKX6-1P78426 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
NKX6-1P78426 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.39□□□□□ -0.27
NKX6-1P78426 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
NKX6-1P78426 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-1P78426 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-1P78426 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.39□□□□□ -0.27
NKX6-1P78426 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-1P78426 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-1P78426 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
NKX6-1P78426 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-1P78426 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-1P78426 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-1P78426 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-1P78426 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-1P78426 ELK2AP-201ENST00000392510 1007 ntBASIC13.39□□□□□ -0.27
NKX6-1P78426 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.39□□□□□ -0.27
NKX6-1P78426 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-1P78426 BAATP1-201ENST00000412284 1225 ntBASIC13.39□□□□□ -0.27
NKX6-1P78426 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.39□□□□□ -0.27
NKX6-1P78426 RPL13AP20-201ENST00000459725 609 ntBASIC13.39□□□□□ -0.27
NKX6-1P78426 KRT8P13-201ENST00000463294 1010 ntBASIC13.39□□□□□ -0.27
NKX6-1P78426 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.39□□□□□ -0.27
NKX6-1P78426 FTH1P14-201ENST00000482930 551 ntBASIC13.39□□□□□ -0.27
NKX6-1P78426 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-1P78426 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-1P78426 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC13.39□□□□□ -0.27
NKX6-1P78426 GAPDHP40-201ENST00000505218 1006 ntBASIC13.39□□□□□ -0.27
NKX6-1P78426 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.39□□□□□ -0.27
NKX6-1P78426 AC120045.2-201ENST00000567334 178 ntBASIC13.39□□□□□ -0.27
NKX6-1P78426 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.39□□□□□ -0.27
NKX6-1P78426 RN7SL560P-201ENST00000577943 264 ntBASIC13.39□□□□□ -0.27
NKX6-1P78426 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.39□□□□□ -0.27
NKX6-1P78426 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.39□□□□□ -0.27
NKX6-1P78426 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-1P78426 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.39□□□□□ -0.27
NKX6-1P78426 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.39□□□□□ -0.27
NKX6-1P78426 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-1P78426 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-1P78426 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.39□□□□□ -0.27
NKX6-1P78426 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-1P78426 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-1P78426 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.39□□□□□ -0.27
NKX6-1P78426 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-1P78426 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-1P78426 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-1P78426 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
NKX6-1P78426 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.39□□□□□ -0.27
NKX6-1P78426 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-1P78426 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-1P78426 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
NKX6-1P78426 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-1P78426 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.39□□□□□ -0.27
NKX6-1P78426 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-1P78426 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-1P78426 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
NKX6-1P78426 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.39□□□□□ -0.27
NKX6-1P78426 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.39□□□□□ -0.27
NKX6-1P78426 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.39□□□□□ -0.27
NKX6-1P78426 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-1P78426 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-1P78426 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.38□□□□□ -0.27
NKX6-1P78426 AC092127.1-201ENST00000567093 3455 ntBASIC13.38□□□□□ -0.27
NKX6-1P78426 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-1P78426 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-1P78426 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-1P78426 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-1P78426 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-1P78426 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-1P78426 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
NKX6-1P78426 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-1P78426 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.38□□□□□ -0.27
NKX6-1P78426 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-1P78426 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
NKX6-1P78426 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-1P78426 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.38□□□□□ -0.27
NKX6-1P78426 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-1P78426 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
NKX6-1P78426 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.38□□□□□ -0.27
NKX6-1P78426 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-1P78426 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.38□□□□□ -0.27
NKX6-1P78426 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.38□□□□□ -0.27
NKX6-1P78426 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-1P78426 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-1P78426 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
NKX6-1P78426 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.38□□□□□ -0.27
NKX6-1P78426 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.38□□□□□ -0.27
NKX6-1P78426 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-1P78426 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-1P78426 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC13.38□□□□□ -0.27
NKX6-1P78426 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.38□□□□□ -0.27
NKX6-1P78426 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
NKX6-1P78426 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.38□□□□□ -0.27
NKX6-1P78426 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.38□□□□□ -0.27
NKX6-1P78426 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
NKX6-1P78426 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.38□□□□□ -0.27
NKX6-1P78426 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms