Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC12.23□□□□□ -0.45
CX3CL1P78423 CDK4-206ENST00000549606 558 ntTSL 2 BASIC12.23□□□□□ -0.45
CX3CL1P78423 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC12.23□□□□□ -0.45
CX3CL1P78423 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.23□□□□□ -0.45
CX3CL1P78423 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.23□□□□□ -0.45
CX3CL1P78423 YTHDF3-AS1-201ENST00000603538 718 ntBASIC12.23□□□□□ -0.45
CX3CL1P78423 AL662799.1-202ENST00000614205 422 ntBASIC12.23□□□□□ -0.45
CX3CL1P78423 MIR8072-201ENST00000614241 80 ntBASIC12.23□□□□□ -0.45
CX3CL1P78423 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CX3CL1P78423 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CX3CL1P78423 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CX3CL1P78423 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CX3CL1P78423 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.23□□□□□ -0.45
CX3CL1P78423 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.23□□□□□ -0.45
CX3CL1P78423 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.23□□□□□ -0.45
CX3CL1P78423 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CX3CL1P78423 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CX3CL1P78423 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.23□□□□□ -0.45
CX3CL1P78423 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
CX3CL1P78423 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CX3CL1P78423 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CX3CL1P78423 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CX3CL1P78423 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CX3CL1P78423 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CX3CL1P78423 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC12.22□□□□□ -0.45
CX3CL1P78423 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.22□□□□□ -0.45
CX3CL1P78423 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
CX3CL1P78423 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CX3CL1P78423 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
CX3CL1P78423 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CX3CL1P78423 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CX3CL1P78423 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.22□□□□□ -0.45
CX3CL1P78423 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.22□□□□□ -0.45
CX3CL1P78423 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CX3CL1P78423 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
CX3CL1P78423 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.22□□□□□ -0.45
CX3CL1P78423 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CX3CL1P78423 WASH3P-207ENST00000560956 1394 ntBASIC12.22□□□□□ -0.45
CX3CL1P78423 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.22□□□□□ -0.45
CX3CL1P78423 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.22□□□□□ -0.45
CX3CL1P78423 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CX3CL1P78423 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CX3CL1P78423 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CX3CL1P78423 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CX3CL1P78423 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC12.22□□□□□ -0.45
CX3CL1P78423 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
CX3CL1P78423 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.22□□□□□ -0.45
CX3CL1P78423 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CX3CL1P78423 MYCLP2-201ENST00000449268 967 ntBASIC12.22□□□□□ -0.45
CX3CL1P78423 AC004066.1-201ENST00000502488 802 ntBASIC12.22□□□□□ -0.45
CX3CL1P78423 AC026410.3-201ENST00000514280 936 ntBASIC12.22□□□□□ -0.45
CX3CL1P78423 API5-211ENST00000534695 560 ntTSL 5 BASIC12.22□□□□□ -0.45
CX3CL1P78423 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CX3CL1P78423 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC12.22□□□□□ -0.45
CX3CL1P78423 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.22□□□□□ -0.45
CX3CL1P78423 BRI3BPP1-201ENST00000594224 787 ntBASIC12.22□□□□□ -0.45
CX3CL1P78423 CHCHD2P3-201ENST00000603038 451 ntBASIC12.22□□□□□ -0.45
CX3CL1P78423 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CX3CL1P78423 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CX3CL1P78423 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CX3CL1P78423 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CX3CL1P78423 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
CX3CL1P78423 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CX3CL1P78423 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CX3CL1P78423 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CX3CL1P78423 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
CX3CL1P78423 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CX3CL1P78423 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
CX3CL1P78423 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CX3CL1P78423 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC12.22□□□□□ -0.45
CX3CL1P78423 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CX3CL1P78423 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.22□□□□□ -0.45
CX3CL1P78423 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CX3CL1P78423 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.21□□□□□ -0.45
CX3CL1P78423 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.21□□□□□ -0.45
CX3CL1P78423 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CX3CL1P78423 AC012508.2-201ENST00000567613 1472 ntBASIC12.21□□□□□ -0.45
CX3CL1P78423 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
CX3CL1P78423 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.21□□□□□ -0.45
CX3CL1P78423 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CX3CL1P78423 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CX3CL1P78423 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
CX3CL1P78423 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.21□□□□□ -0.45
CX3CL1P78423 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CX3CL1P78423 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CX3CL1P78423 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CX3CL1P78423 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CX3CL1P78423 AC005252.3-201ENST00000623855 2258 ntBASIC12.21□□□□□ -0.45
CX3CL1P78423 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CX3CL1P78423 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CX3CL1P78423 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CX3CL1P78423 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
CX3CL1P78423 AC104457.1-201ENST00000401024 814 ntBASIC12.21□□□□□ -0.45
CX3CL1P78423 AC134915.1-201ENST00000426461 574 ntBASIC12.21□□□□□ -0.45
CX3CL1P78423 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.21□□□□□ -0.45
CX3CL1P78423 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.21□□□□□ -0.45
CX3CL1P78423 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC12.21□□□□□ -0.45
CX3CL1P78423 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.21□□□□□ -0.45
CX3CL1P78423 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC12.21□□□□□ -0.45
CX3CL1P78423 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms