Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RAE1P78406 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAE1P78406 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAE1P78406 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
RAE1P78406 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAE1P78406 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAE1P78406 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAE1P78406 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
RAE1P78406 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RAE1P78406 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAE1P78406 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
RAE1P78406 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.27□□□□□ -0.12
RAE1P78406 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAE1P78406 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RAE1P78406 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RAE1P78406 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAE1P78406 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAE1P78406 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.27□□□□□ -0.13
RAE1P78406 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.27□□□□□ -0.13
RAE1P78406 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.27□□□□□ -0.13
RAE1P78406 FO681548.1-201ENST00000455617 1132 ntBASIC14.27□□□□□ -0.13
RAE1P78406 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.27□□□□□ -0.13
RAE1P78406 KRT18P25-201ENST00000508931 1278 ntBASIC14.27□□□□□ -0.13
RAE1P78406 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.27□□□□□ -0.13
RAE1P78406 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.27□□□□□ -0.13
RAE1P78406 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.27□□□□□ -0.13
RAE1P78406 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.27□□□□□ -0.13
RAE1P78406 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAE1P78406 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
RAE1P78406 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAE1P78406 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAE1P78406 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAE1P78406 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAE1P78406 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.27□□□□□ -0.13
RAE1P78406 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAE1P78406 LINC01230-201ENST00000625222 3017 ntBASIC14.27□□□□□ -0.13
RAE1P78406 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAE1P78406 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
RAE1P78406 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
RAE1P78406 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAE1P78406 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.27□□□□□ -0.13
RAE1P78406 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAE1P78406 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.26□□□□□ -0.13
RAE1P78406 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAE1P78406 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAE1P78406 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.26□□□□□ -0.13
RAE1P78406 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
RAE1P78406 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.26□□□□□ -0.13
RAE1P78406 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAE1P78406 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.26□□□□□ -0.13
RAE1P78406 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAE1P78406 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
RAE1P78406 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.26□□□□□ -0.13
RAE1P78406 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RAE1P78406 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
RAE1P78406 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RAE1P78406 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAE1P78406 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAE1P78406 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
RAE1P78406 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAE1P78406 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.26□□□□□ -0.13
RAE1P78406 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAE1P78406 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAE1P78406 AC007969.1-201ENST00000433675 447 ntBASIC14.26□□□□□ -0.13
RAE1P78406 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAE1P78406 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.26□□□□□ -0.13
RAE1P78406 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.26□□□□□ -0.13
RAE1P78406 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.26□□□□□ -0.13
RAE1P78406 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.26□□□□□ -0.13
RAE1P78406 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.26□□□□□ -0.13
RAE1P78406 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.26□□□□□ -0.13
RAE1P78406 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
RAE1P78406 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.26□□□□□ -0.13
RAE1P78406 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAE1P78406 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RAE1P78406 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.26□□□□□ -0.13
RAE1P78406 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.26□□□□□ -0.13
RAE1P78406 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAE1P78406 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAE1P78406 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.26□□□□□ -0.13
RAE1P78406 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
RAE1P78406 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
RAE1P78406 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAE1P78406 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
RAE1P78406 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.26□□□□□ -0.13
RAE1P78406 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.25□□□□□ -0.13
RAE1P78406 AC152010.1-201ENST00000415779 2006 ntBASIC14.25□□□□□ -0.13
RAE1P78406 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAE1P78406 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAE1P78406 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAE1P78406 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAE1P78406 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAE1P78406 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAE1P78406 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.25□□□□□ -0.13
RAE1P78406 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.25□□□□□ -0.13
RAE1P78406 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.25□□□□□ -0.13
RAE1P78406 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.25□□□□□ -0.13
RAE1P78406 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
RAE1P78406 AL138725.1-201ENST00000407347 1314 ntBASIC14.25□□□□□ -0.13
RAE1P78406 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms