Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN2P57739 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.84□□□□□ -0.03
CLDN2P57739 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CLDN2P57739 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN2P57739 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN2P57739 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CLDN2P57739 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CLDN2P57739 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN2P57739 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN2P57739 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN2P57739 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CLDN2P57739 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN2P57739 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN2P57739 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CLDN2P57739 AC092384.3-202ENST00000564646 2873 ntBASIC14.83□□□□□ -0.03
CLDN2P57739 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CLDN2P57739 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.83□□□□□ -0.03
CLDN2P57739 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.83□□□□□ -0.03
CLDN2P57739 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CLDN2P57739 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.83□□□□□ -0.03
CLDN2P57739 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.83□□□□□ -0.03
CLDN2P57739 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.83□□□□□ -0.04
CLDN2P57739 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.83□□□□□ -0.04
CLDN2P57739 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN2P57739 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN2P57739 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.83□□□□□ -0.04
CLDN2P57739 RN7SKP230-201ENST00000365642 335 ntBASIC14.83□□□□□ -0.04
CLDN2P57739 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN2P57739 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.83□□□□□ -0.04
CLDN2P57739 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.83□□□□□ -0.04
CLDN2P57739 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN2P57739 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.83□□□□□ -0.04
CLDN2P57739 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.83□□□□□ -0.04
CLDN2P57739 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.83□□□□□ -0.04
CLDN2P57739 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CLDN2P57739 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.83□□□□□ -0.04
CLDN2P57739 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN2P57739 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN2P57739 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.83□□□□□ -0.04
CLDN2P57739 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.83□□□□□ -0.04
CLDN2P57739 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN2P57739 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.83□□□□□ -0.04
CLDN2P57739 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN2P57739 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN2P57739 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN2P57739 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN2P57739 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.83□□□□□ -0.04
CLDN2P57739 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN2P57739 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN2P57739 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
CLDN2P57739 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN2P57739 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN2P57739 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN2P57739 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN2P57739 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.82□□□□□ -0.04
CLDN2P57739 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.82□□□□□ -0.04
CLDN2P57739 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.82□□□□□ -0.04
CLDN2P57739 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN2P57739 AC126365.1-201ENST00000578585 1514 ntBASIC14.82□□□□□ -0.04
CLDN2P57739 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CLDN2P57739 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN2P57739 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN2P57739 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN2P57739 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.82□□□□□ -0.04
CLDN2P57739 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN2P57739 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN2P57739 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.82□□□□□ -0.04
CLDN2P57739 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN2P57739 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN2P57739 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
CLDN2P57739 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN2P57739 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CLDN2P57739 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.82□□□□□ -0.04
CLDN2P57739 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.82□□□□□ -0.04
CLDN2P57739 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN2P57739 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.82□□□□□ -0.04
CLDN2P57739 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.82□□□□□ -0.04
CLDN2P57739 MIR4783-201ENST00000580343 82 ntBASIC14.82□□□□□ -0.04
CLDN2P57739 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.82□□□□□ -0.04
CLDN2P57739 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.82□□□□□ -0.04
CLDN2P57739 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.82□□□□□ -0.04
CLDN2P57739 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.82□□□□□ -0.04
CLDN2P57739 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CLDN2P57739 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.82□□□□□ -0.04
CLDN2P57739 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CLDN2P57739 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CLDN2P57739 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.82□□□□□ -0.04
CLDN2P57739 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CLDN2P57739 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.82□□□□□ -0.04
CLDN2P57739 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN2P57739 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN2P57739 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN2P57739 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN2P57739 KRT8P29-201ENST00000420409 1371 ntBASIC14.82□□□□□ -0.04
CLDN2P57739 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.82□□□□□ -0.04
CLDN2P57739 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.82□□□□□ -0.04
CLDN2P57739 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.82□□□□□ -0.04
CLDN2P57739 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN2P57739 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN2P57739 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms