Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC005252.2-201ENST00000624630 1141 ntBASIC13.9□□□□□ -0.18
CLDN20P56880 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN20P56880 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN20P56880 AL138799.1-201ENST00000448213 1675 ntBASIC13.9□□□□□ -0.18
CLDN20P56880 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN20P56880 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN20P56880 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN20P56880 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN20P56880 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CLDN20P56880 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN20P56880 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN20P56880 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CLDN20P56880 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN20P56880 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN20P56880 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CLDN20P56880 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CLDN20P56880 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.9□□□□□ -0.18
CLDN20P56880 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.19
CLDN20P56880 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CLDN20P56880 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CLDN20P56880 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN20P56880 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN20P56880 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN20P56880 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CLDN20P56880 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN20P56880 REXO1L2P-201ENST00000425429 2069 ntBASIC13.89□□□□□ -0.19
CLDN20P56880 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN20P56880 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN20P56880 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN20P56880 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.89□□□□□ -0.19
CLDN20P56880 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.89□□□□□ -0.19
CLDN20P56880 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CLDN20P56880 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN20P56880 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN20P56880 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
CLDN20P56880 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN20P56880 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CLDN20P56880 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.89□□□□□ -0.19
CLDN20P56880 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN20P56880 WBP2-203ENST00000433525 928 ntTSL 2 BASIC13.89□□□□□ -0.19
CLDN20P56880 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN20P56880 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.89□□□□□ -0.19
CLDN20P56880 AC007389.4-201ENST00000454674 793 ntBASIC13.89□□□□□ -0.19
CLDN20P56880 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN20P56880 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN20P56880 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN20P56880 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.89□□□□□ -0.19
CLDN20P56880 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.89□□□□□ -0.19
CLDN20P56880 CLUHP6-201ENST00000580789 941 ntBASIC13.89□□□□□ -0.19
CLDN20P56880 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.89□□□□□ -0.19
CLDN20P56880 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.89□□□□□ -0.19
CLDN20P56880 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.89□□□□□ -0.19
CLDN20P56880 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN20P56880 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
CLDN20P56880 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN20P56880 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.89□□□□□ -0.19
CLDN20P56880 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN20P56880 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN20P56880 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN20P56880 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN20P56880 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.89□□□□□ -0.19
CLDN20P56880 CICP11-201ENST00000434745 2827 ntBASIC13.89□□□□□ -0.19
CLDN20P56880 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN20P56880 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN20P56880 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN20P56880 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN20P56880 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN20P56880 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.89□□□□□ -0.19
CLDN20P56880 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN20P56880 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.88□□□□□ -0.19
CLDN20P56880 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
CLDN20P56880 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CLDN20P56880 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CLDN20P56880 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN20P56880 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN20P56880 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN20P56880 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN20P56880 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN20P56880 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CLDN20P56880 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.88□□□□□ -0.19
CLDN20P56880 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN20P56880 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.88□□□□□ -0.19
CLDN20P56880 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CLDN20P56880 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN20P56880 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.88□□□□□ -0.19
CLDN20P56880 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.88□□□□□ -0.19
CLDN20P56880 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.88□□□□□ -0.19
CLDN20P56880 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.88□□□□□ -0.19
CLDN20P56880 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
CLDN20P56880 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CLDN20P56880 AP001582.1-201ENST00000525856 295 ntBASIC13.88□□□□□ -0.19
CLDN20P56880 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN20P56880 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.88□□□□□ -0.19
CLDN20P56880 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN20P56880 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.88□□□□□ -0.19
CLDN20P56880 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.88□□□□□ -0.19
CLDN20P56880 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
CLDN20P56880 AC008735.3-201ENST00000596646 500 ntBASIC13.88□□□□□ -0.19
CLDN20P56880 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.88□□□□□ -0.19
CLDN20P56880 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms